Trevor Bedford
Trevor Bedford
Associate Professor, Fred Hutchinson Cancer Research Center
Verified email at bedford.io - Homepage
Title
Cited by
Cited by
Year
Nextstrain: real-time tracking of pathogen evolution
J Hadfield, C Megill, SM Bell, J Huddleston, B Potter, C Callender, ...
Bioinformatics 34 (23), 4121-4123, 2018
8872018
Improving the accuracy of demographic and molecular clock model comparison while accommodating phylogenetic uncertainty
G Baele, P Lemey, T Bedford, A Rambaut, MA Suchard, AV Alekseyenko
Molecular biology and evolution 29 (9), 2157-2167, 2012
8802012
The early spread and epidemic ignition of HIV-1 in human populations
NR Faria, A Rambaut, MA Suchard, G Baele, T Bedford, MJ Ward, ...
science 346 (6205), 56-61, 2014
6562014
Persistent HIV-1 replication maintains the tissue reservoir during therapy
R Lorenzo-Redondo, HR Fryer, T Bedford, EY Kim, J Archer, SLK Pond, ...
Nature 530 (7588), 51-56, 2016
517*2016
Multiplex PCR method for MinION and Illumina sequencing of Zika and other virus genomes directly from clinical samples
J Quick, ND Grubaugh, ST Pullan, IM Claro, AD Smith, K Gangavarapu, ...
Nature protocols 12 (6), 1261, 2017
4702017
Establishment and cryptic transmission of Zika virus in Brazil and the Americas
NR Faria, J Quick, IM Claro, J Theze, JG de Jesus, M Giovanetti, ...
Nature 546 (7658), 406-410, 2017
4232017
Global circulation patterns of seasonal influenza viruses vary with antigenic drift
T Bedford, S Riley, IG Barr, S Broor, M Chadha, NJ Cox, RS Daniels, ...
Nature 523 (7559), 217-220, 2015
3562015
Viral phylodynamics
EM Volz, K Koelle, T Bedford
PLoS Comput Biol 9 (3), e1002947, 2013
2882013
Genetic diversity and protective efficacy of the RTS, S/AS01 malaria vaccine
DE Neafsey, M Juraska, T Bedford, D Benkeser, C Valim, A Griggs, ...
New England Journal of Medicine 373 (21), 2025-2037, 2015
2742015
Virus genomes reveal factors that spread and sustained the Ebola epidemic
G Dudas, LM Carvalho, T Bedford, AJ Tatem, G Baele, NR Faria, DJ Park, ...
Nature 544 (7650), 309-315, 2017
2732017
Ebola virus epidemiology, transmission, and evolution during seven months in Sierra Leone
DJ Park, G Dudas, S Wohl, A Goba, SLM Whitmer, KG Andersen, ...
Cell 161 (7), 1516-1526, 2015
2632015
Integrating influenza antigenic dynamics with molecular evolution
T Bedford, MA Suchard, P Lemey, G Dudas, V Gregory, AJ Hay, ...
elife 3, e01914, 2014
2562014
Unifying viral genetics and human transportation data to predict the global transmission dynamics of human influenza H3N2
P Lemey, A Rambaut, T Bedford, N Faria, F Bielejec, G Baele, CA Russell, ...
PloS pathog 10 (2), e1003932, 2014
2482014
Genomic epidemiology reveals multiple introductions of Zika virus into the United States
ND Grubaugh, JT Ladner, MUG Kraemer, G Dudas, AL Tan, ...
Nature 546 (7658), 401-405, 2017
2472017
Global migration dynamics underlie evolution and persistence of human influenza A (H3N2)
T Bedford, S Cobey, P Beerli, M Pascual
PLoS Pathog 6 (5), e1000918, 2010
1732010
Optimization of gene expression by natural selection
T Bedford, DL Hartl
Proceedings of the National Academy of Sciences 106 (4), 1133-1138, 2009
1492009
Genomic surveillance reveals multiple introductions of SARS-CoV-2 into Northern California
X Deng, W Gu, S Federman, L Du Plessis, OG Pybus, NR Faria, C Wang, ...
Science 369 (6503), 582-587, 2020
133*2020
Prediction, dynamics, and visualization of antigenic phenotypes of seasonal influenza viruses
RA Neher, T Bedford, RS Daniels, CA Russell, BI Shraiman
Proceedings of the National Academy of Sciences 113 (12), E1701-E1709, 2016
1302016
MERS-CoV spillover at the camel-human interface
G Dudas, LM Carvalho, A Rambaut, T Bedford
Elife 7, e31257, 2018
1282018
Cryptic transmission of SARS-CoV-2 in Washington state
T Bedford, AL Greninger, P Roychoudhury, LM Starita, M Famulare, ...
Science 370 (6516), 571-575, 2020
1222020
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