Steffen Heber
Steffen Heber
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The deep evolution of metazoan microRNAs
BM Wheeler, AM Heimberg, VN Moy, EA Sperling, TW Holstein, S Heber, ...
Evolution & development 11 (1), 50-68, 2009
Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana
K Mayer, C Schüller, R Wambutt, G Murphy, G Volckaert, T Pohl, ...
Nature 402 (6763), 769-777, 1999
Towards a Systems Approach for Lignin Biosynthesis in Populus trichocarpa: Transcript Abundance and Specificity of the Monolignol Biosynthetic Genes
R Shi, YH Sun, Q Li, S Heber, R Sederoff, VL Chiang
Plant and Cell Physiology 51 (1), 144-163, 2010
Splicing graphs and EST assembly problem
S Heber, M Alekseyev, SH Sze, H Tang, PA Pevzner
Bioinformatics 18 (suppl_1), S181-S188, 2002
Gene-specific translation regulation mediated by the hormone-signaling molecule EIN2
C Merchante, J Brumos, J Yun, Q Hu, KR Spencer, P Enríquez, BM Binder, ...
Cell 163 (3), 684-697, 2015
Finding all common intervals of k permutations
S Heber, J Stoye
Annual Symposium on Combinatorial Pattern Matching, 207-218, 2001
Targeted combinatorial alternative splicing generates brain region-specific repertoires of neurexins
D Schreiner, TM Nguyen, G Russo, S Heber, A Patrignani, E Ahrné, ...
Neuron 84 (2), 386-398, 2014
The Alternative Splicing Gallery (ASG): bridging the gap between genome and transcriptome
J Leipzig, P Pevzner, S Heber
Nucleic Acids Research 32 (13), 3977-3983, 2004
Quality assessment of Affymetrix GeneChip data
S Heber, B Sick
Omics: a journal of integrative biology 10 (3), 358-368, 2006
RACE : Remote Analysis Computation for gene Expression data
M Psarros, S Heber, M Sick, G Thoppae, K Harshman, B Sick
Nucleic Acids Research 33 (suppl_2), W638-W643, 2005
High-throughput RNA sequencing of pseudomonas-infected Arabidopsis reveals hidden transcriptome complexity and novel splice variants
BE Howard, Q Hu, AC Babaoglu, M Chandra, M Borghi, X Tan, L He, ...
PloS one 8 (10), e74183, 2013
Non-monotonic dose–response relationship in steroid hormone receptor-mediated gene expression
L Li, ME Andersen, S Heber, Q Zhang
Journal of molecular endocrinology 38 (5), 569-585, 2007
Common intervals and sorting by reversals: a marriage of necessity
A Bergeron, S Heber, J Stoye
Bioinformatics 18 (Suppl 2), 2002
Algorithms for finding gene clusters
S Heber, J Stoye
International Workshop on Algorithms in Bioinformatics, 252-263, 2001
Accessible proteomics space and its implications for peak capacity for zero‐, one‐and two‐dimensional separations coupled with FT‐ICR and TOF mass spectrometry
JL Frahm, BE Howard, S Heber, DC Muddiman
Journal of mass spectrometry 41 (3), 281-288, 2006
Towards reliable isoform quantification using RNA-SEQ data
BE Howard, S Heber
BMC bioinformatics 11 (3), 1-13, 2010
In silico prediction of yeast deletion phenotypes
S Saha, S Heber
Genet Mol Res 5 (1), 224-232, 2006
Detection of Alternative Splice Variants at the Proteome Level in Aspergillus flavus
KY Chang, DR Georgianna, S Heber, GA Payne, DC Muddiman
Journal of proteome research 9 (3), 1209-1217, 2010
Mapping analysis of the Xylella fastidiosa genome
M Frohme, AA Camargo, S Heber, C Czink, AJD Simpson, JD Hoheisel, ...
Nucleic Acids Research 28 (16), 3100-3104, 2000
Transcriptomic Signature of the SHATTERPROOF2 Expression Domain Reveals the Meristematic Nature of Arabidopsis Gynoecial Medial Domain  
GH Villarino, Q Hu, S Manrique, M Flores-Vergara, B Sehra, L Robles, ...
Plant physiology 171 (1), 42-61, 2016
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