Wai Kit Ong
Cited by
Cited by
The MetaCyc database of metabolic pathways and enzymes
R Caspi, R Billington, CA Fulcher, IM Keseler, A Kothari, ...
Nucleic acids research 46 (D1), D633-D639, 2018
The BioCyc collection of microbial genomes and metabolic pathways
PD Karp, R Billington, R Caspi, CA Fulcher, M Latendresse, A Kothari, ...
Briefings in bioinformatics 20 (4), 1085-1093, 2019
Computational methods in metabolic engineering for strain design
MR Long, WK Ong, JL Reed
Current opinion in biotechnology 34, 135-141, 2015
The EcoCyc Database 2018
PD Karp, WK Ong, S Paley, R Billington, R Caspi, C Fulcher, A Kothari, ...
EcoSal Plus, 2018
The MetaCyc database of metabolic pathways and enzymes-a 2019 update
R Caspi, R Billington, IM Keseler, A Kothari, M Krummenacker, ...
Nucleic acids research 48 (D1), D445-D453, 2020
Comparisons of Shewanella strains based on genome annotations, modeling, and experiments
WK Ong, TT Vu, KN Lovendahl, JM Llull, MH Serres, MF Romine, JL Reed
BMC systems biology 8 (1), 1-11, 2014
Pathway Tools version 23.0 update: software for pathway/genome informatics and systems biology
PD Karp, PE Midford, R Billington, A Kothari, M Krummenacker, ...
Briefings in bioinformatics 22 (1), 109-126, 2021
A comparison of microbial genome web portals
PD Karp, N Ivanova, M Krummenacker, N Kyrpides, M Latendresse, ...
Frontiers in microbiology 10, 208, 2019
Expression of phosphofructokinase is not sufficient to enable Embden-Meyerhof-Parnas glycolysis in Zymomonas mobilis ZM4
MM Felczak, TB Jacobson, WK Ong, D Amador-Noguez, M TerAvest
Frontiers in microbiology 10, 2270, 2019
BioCyc: a genomic and metabolic web portal with multiple omics analytical tools
R Caspi, R Billington, CA Fulcher, IM Keseler, A Kothari, ...
The FASEB Journal 33 (S1), 473.2-473.2, 2019
Inventory control and LQG: connections and extensions
WK Ong, EJ Durango-Cohen, DJ Chmielewski
Proceedings of the 2010 American Control Conference, 4391-4396, 2010
Model-driven analysis of mutant fitness experiments improves genome-scale metabolic models of Zymomonas mobilis ZM4
WK Ong, DK Courtney, S Pan, RB Andrade, PJ Kiley, BF Pfleger, JL Reed
PLOS Computational Biology 16 (8), e1008137, 2020
Metabolic Reconstruction and Modeling From Sequenced Genomes
PD Karp, R Caspi, WK Ong
The FASEB Journal 34 (S1), 1-1, 2020
Taxonomic weighting improves the accuracy of a gap-filling algorithm for metabolic models
WK Ong, PE Midford, PD Karp
Bioinformatics 36 (6), 1823-1830, 2020
MetaCyc: a database of enzymes and pathways with a broad coverage of natural products biosynthesis
R Caspi, R Billington, I Keseler, A Kothari, M Krummenacker, P Midford, ...
3rd International Conference on Natural Products Discovery and Development …, 2020
Erratum for Tong et al.,“Gene dispensability in Escherichia coli grown in thirty different carbon environments.” mBio 11: e02865-20
M Tong, S French, SS El Zahed, WK Ong, PD Karp, ED Brown
Constraint-Based Models for Characterizing and Engineering Zymomonas and Shewanella Metabolism
WK Ong
The University of Wisconsin-Madison, 2016
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