Takeshi Kawakami
Takeshi Kawakami
Senior Scientist, Embark Veterinary
Verified email at - Homepage
Cited by
Cited by
The genomic landscape of species divergence in Ficedula flycatchers
H Ellegren, L Smeds, R Burri, PI Olason, N Backström, T Kawakami, ...
Nature 491 (7426), 756-760, 2012
Linked selection and recombination rate variation drive the evolution of the genomic landscape of differentiation across the speciation continuum of Ficedula flycatchers
R Burri, A Nater, T Kawakami, CF Mugal, PI Olason, L Smeds, A Suh, ...
Genome research 25 (11), 1656-1665, 2015
A high‐density linkage map enables a second‐generation collared flycatcher genome assembly and reveals the patterns of avian recombination rate variation and chromosomal evolution
T Kawakami, L Smeds, N Backström, A Husby, A Qvarnström, CF Mugal, ...
Molecular ecology 23 (16), 4035-4058, 2014
Demographic divergence history of pied flycatcher and collared flycatcher inferred from whole-genome re-sequencing data
K Nadachowska-Brzyska, R Burri, PI Olason, T Kawakami, L Smeds, ...
PLoS genetics 9 (11), e1003942, 2013
Resolving evolutionary relationships in closely related species with whole-genome sequencing data
A Nater, R Burri, T Kawakami, L Smeds, H Ellegren
Systematic Biology 64 (6), 1000-1017, 2015
Differential gene flow of mitochondrial and nuclear DNA markers among chromosomal races of Australian morabine grasshoppers (Vandiemenella, viatica species group)
T Kawakami, RK Butlin, M Adams, KM Saint, DJ Paull, SJB Cooper
Molecular ecology 16 (23), 5044-5056, 2007
Whole‐genome patterns of linkage disequilibrium across flycatcher populations clarify the causes and consequences of fine‐scale recombination rate variation in birds
T Kawakami, CF Mugal, A Suh, A Nater, R Burri, L Smeds, H Ellegren
Molecular ecology 26 (16), 4158-4172, 2017
Genomewide patterns of variation in genetic diversity are shared among populations, species and higher‐order taxa
N Vijay, M Weissensteiner, R Burri, T Kawakami, H Ellegren, JBW Wolf
Molecular Ecology 26 (16), 4284-4295, 2017
Increasing the power of genome wide association studies in natural populations using repeated measures–evaluation and implementation
L Rönnegård, SE McFarlane, A Husby, T Kawakami, H Ellegren, ...
Methods in ecology and evolution 7 (7), 792-799, 2016
Estimation of linkage disequilibrium and interspecific gene flow in Ficedula flycatchers by a newly developed 50k single‐nucleotide polymorphism array
T Kawakami, N Backström, R Burri, A Husby, P Olason, AM Rice, M Ålund, ...
Molecular ecology resources 14 (6), 1248-1260, 2014
Natural selection drives clinal life history patterns in the perennial sunflower species, Helianthus maximiliani
T Kawakami, TJ Morgan, JB Nippert, TW Ocheltree, R Keith, P Dhakal, ...
Molecular Ecology 20 (11), 2318-2328, 2011
Genome-wide association mapping in a wild avian population identifies a link between genetic and phenotypic variation in a life-history trait
A Husby, T Kawakami, L Rönnegård, L Smeds, H Ellegren, A Qvarnström
Proceedings of the Royal Society B: Biological Sciences 282 (1806), 20150156, 2015
Different scales of Ty1/copia-like retrotransposon proliferation in the genomes of three diploid hybrid sunflower species
T Kawakami, SC Strakosh, Y Zhen, MC Ungerer
Heredity 104 (4), 341-350, 2010
Transposable element proliferation and genome expansion are rare in contemporary sunflower hybrid populations despite widespread transcriptional activity of LTR retrotransposons
T Kawakami, P Dhakal, AN Katterhenry, CA Heatherington, MC Ungerer
Genome Biology and Evolution 3, 156-167, 2011
Genetic analysis of a chromosomal hybrid zone in the Australian morabine grasshoppers (Vandiemenella, viatica species group)
T Kawakami, RK Butlin, M Adams, DJ Paull, SJB Cooper
Evolution 63 (1), 139-152, 2009
Genomic identification and characterization of the pseudoautosomal region in highly differentiated avian sex chromosomes
L Smeds, T Kawakami, R Burri, P Bolivar, A Husby, A Qvarnström, ...
Nature communications 5 (1), 5448, 2014
Evidence for population fragmentation within a subterranean aquatic habitat in the Western Australian desert
MT Guzik, SJB Cooper, WF Humphreys, S Ong, T Kawakami, AD Austin
Heredity 107 (3), 215-230, 2011
Genetically encoded libraries of nonstandard peptides
T Kawakami, H Murakami
Journal of Nucleic Acids 2012, 2012
Comparative analysis of morabine grasshopper genomes reveals highly abundant transposable elements and rapidly proliferating satellite DNA repeats
OM Palacios-Gimenez, J Koelman, M Palmada-Flores, TM Bradford, ...
BMC biology 18, 1-21, 2020
Chromosomal Speciation Revisited: Modes of Diversification in Australian Morabine Grasshoppers (Vandiemenella, viatica Species Group)
T Kawakami, RK Butlin, SJB Cooper
Insects 2 (1), 49-61, 2011
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