Victoria Popic
Title
Cited by
Cited by
Year
Fast and scalable inference of multi-sample cancer lineages
V Popic, R Salari, I Hajirasouliha, D Kashef-Haghighi, RB West, ...
Genome biology 16 (1), 1-17, 2015
1692015
Short read alignment with populations of genomes
L Huang, V Popic, S Batzoglou
Bioinformatics 29 (13), i361-i370, 2013
1312013
Abstractions for usable information flow control in Aeolus
W Cheng, DRK Ports, D Schultz, V Popic, A Blankstein, J Cowling, ...
2012 {USENIX} Annual Technical Conference ({USENIX}{ATC} 12), 139-151, 2012
1062012
Composition and reuse with compiled domain-specific languages
AK Sujeeth, T Rompf, KJ Brown, HJ Lee, H Chafi, V Popic, M Wu, ...
European Conference on Object-Oriented Programming, 52-78, 2013
802013
A hybrid cloud read aligner based on MinHash and kmer voting that preserves privacy
V Popic, S Batzoglou
Nature communications 8 (1), 1-7, 2017
302017
Privacy-preserving read mapping using locality sensitive hashing and secure kmer voting
V Popic, S Batzoglou
bioRxiv, 046920, 2016
82016
Meltos: multi-sample tumor phylogeny reconstruction for structural variants
C Ricketts, D Seidman, V Popic, F Hormozdiari, S Batzoglou, ...
Bioinformatics 36 (4), 1082-1090, 2020
52020
Fast metagenomic binning via hashing and bayesian clustering
V Popic, V Kuleshov, M Snyder, S Batzoglou
Journal of Computational Biology 25 (7), 677-688, 2018
52018
Audit trails in the Aeolus distributed security platform
V Popic
52010
Using LICHeE and BAMSE for reconstructing cancer phylogenetic trees
C Ricketts, V Popic, H Toosi, I Hajirasouliha
Current protocols in bioinformatics 62 (1), e49, 2018
42018
GATTACA: Lightweight Metagenomic Binning Using Kmer Counting
V Popic, V Kuleshov, M Snyder
Research in Computational Molecular Biology, 391, 2017
3*2017
Parallizing the push-relabel max flow algorithm
V Popic, J Vélez
32010
Dna sequencing using hydrogel beads
YS Wu, F Gorpe-Yasar, TK Khurana, V Popic, EB Jaeger, M Ronaghi
US Patent App. 16/272,870, 2019
12019
High-throughput RNA isoform sequencing using programmable cDNA concatenation
AM Al'Khafaji, JT Smith, KV Garimella, M Babadi, M Sade-Feldman, ...
bioRxiv, 2021
2021
Spatial Indexing of Genetic Material and Library Preparation Using Hydrogel Beads and Flow Cells
TK Khurana, YS Wu, XJ Chen, F Gorpe-Yasar, YY Lin, V Popic, EB Jaeger, ...
US Patent App. 16/626,115, 2020
2020
Addressing the DNA Deluge: Algorithmic Methods for Large-Scale Genome Analysis
V Popic
Stanford University, 2017
2017
Cancerous Tissue Classification Using Microarray Gene Expression
PC Chen, V Popic, Y Liu
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Articles 1–17