Martin Swain
Martin Swain
Senior Lecturer in Bioinformatics, Aberystwyth University
Geverifieerd e-mailadres voor aber.ac.uk
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A post-assembly genome-improvement toolkit (PAGIT) to obtain annotated genomes from contigs
MT Swain, IJ Tsai, SA Assefa, C Newbold, M Berriman, TD Otto
Nature protocols 7 (7), 1260-1284, 2012
1862012
Genome sequence of the tsetse fly (Glossina morsitans): vector of African trypanosomiasis
International Glossina Genome Initiative
Science 344 (6182), 380-386, 2014
1752014
Grid-enabling data mining applications with DataMiningGrid: An architectural perspective
V Stankovski, M Swain, V Kravtsov, T Niessen, D Wegener, J Kindermann, ...
Future Generation Computer Systems 24 (4), 259-279, 2008
1132008
Whole genome analysis of a schistosomiasis-transmitting freshwater snail
CM Adema, LDW Hillier, CS Jones, ES Loker, M Knight, P Minx, ...
Nature communications 8 (1), 1-12, 2017
1122017
Protein and small non-coding RNA-enriched extracellular vesicles are released by the pathogenic blood fluke Schistosoma mansoni
FC Nowacki, MT Swain, OI Klychnikov, U Niazi, A Ivens, JF Quintana, ...
Journal of extracellular vesicles 4 (1), 28665, 2015
1002015
Restriction and recruitment-gene duplication and the origin and evolution of snake venom toxins
AD Hargreaves, MT Swain, MJ Hegarty, DW Logan, JF Mulley
Genome Biology and Evolution 6 (8), 2088-2095, 2014
982014
De novo assembly of red clover transcriptome based on RNA-Seq data provides insight into drought response, gene discovery and marker identification
SA Yates, MT Swain, MJ Hegarty, I Chernukin, M Lowe, GG Allison, ...
BMC genomics 15 (1), 453, 2014
972014
A metagenomic snapshot of taxonomic and functional diversity in an alpine glacier cryoconite ecosystem
A Edwards, JA Pachebat, M Swain, M Hegarty, AJ Hodson, ...
Environmental Research Letters 8 (3), 035003, 2013
832013
Red clover (Trifolium pratense L.) draft genome provides a platform for trait improvement
JJ De Vega, S Ayling, M Hegarty, D Kudrna, JL Goicoechea, Ĺ Ergon, ...
Scientific reports 5, 17394, 2015
722015
Presence of extensive Wolbachia symbiont insertions discovered in the genome of its host Glossina morsitans morsitans
C Brelsfoard, G Tsiamis, M Falchetto, LM Gomulski, E Telleria, U Alam, ...
PLoS Negl Trop Dis 8 (4), e2728, 2014
652014
Upgrading short-read animal genome assemblies to chromosome level using comparative genomics and a universal probe set
J Damas, R O'connor, M Farré, VPE Lenis, HJ Martell, A Mandawala, ...
Genome research 27 (5), 875-884, 2017
572017
Testing the Toxicofera: comparative transcriptomics casts doubt on the single, early evolution of the reptile venom system
AD Hargreaves, MT Swain, DW Logan, JF Mulley
Toxicon 92, 140-156, 2014
472014
Generation of whole genome sequences of new Cryptosporidium hominis and Cryptosporidium parvum isolates directly from stool samples
SJ Hadfield, JA Pachebat, MT Swain, G Robinson, SJS Cameron, ...
Bmc Genomics 16 (1), 650, 2015
462015
Complex system simulations with qoscosgrid
K Kurowski, W de Back, W Dubitzky, L Gulyás, G Kampis, M Mamonski, ...
Computational Science–ICCS 2009, 387-396, 2009
452009
Epigenetic regulation of sex ratios may explain natural variation in self-fertilization rates
A Ellison, CM Rodriguez Lopez, P Moran, J Breen, M Swain, M Megias, ...
Proceedings of the Royal Society B: Biological Sciences 282 (1819), 20151900, 2015
362015
Comparative study of three commonly used continuous deterministic methods for modeling gene regulation networks
M Swain, J Mandel, W Dubitzky
BMC bioinformatics 11 (1), 459, 2010
332010
Digging deep into the data mine with DataMiningGrid
V Stankovski, M Swain, V Kravtsov, T Niessen, D Wegener, M Röhm, ...
IEEE internet computing 12 (6), 69-76, 2008
332008
Schistosoma comparative genomics: integrating genome structure, parasite biology and anthelmintic discovery
MT Swain, DM Larkin, CR Caffrey, SJ Davies, A Loukas, PJ Skelly, ...
Trends in parasitology 27 (12), 555-564, 2011
292011
Correlation between bacterial G+ C content, genome size and the G+ C content of associated plasmids and bacteriophages
A Almpanis, M Swain, D Gatherer, N McEwan
Microbial genomics 4 (4), 2018
282018
Comparative genomic analysis of six Glossina genomes, vectors of African trypanosomes
GM Attardo, AMM Abd-Alla, A Acosta-Serrano, JE Allen, R Bateta, ...
Genome biology 20 (1), 1-31, 2019
24*2019
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Artikelen 1–20