Sofie Van Gassen
Sofie Van Gassen
Verified email at ugent.be
TitleCited byYear
Unsupervised high-dimensional analysis aligns dendritic cells across tissues and species
M Guilliams, CA Dutertre, CL Scott, N McGovern, D Sichien, S Chakarov, ...
Immunity 45 (3), 669-684, 2016
2832016
Computational flow cytometry: helping to make sense of high-dimensional immunology data
Y Saeys, S Van Gassen, BN Lambrecht
Nature Reviews Immunology 16 (7), 449, 2016
1962016
FlowSOM: Using self‐organizing maps for visualization and interpretation of cytometry data
S Van Gassen, B Callebaut, MJ Van Helden, BN Lambrecht, P Demeester, ...
Cytometry Part A 87 (7), 636-645, 2015
1922015
IRF8 transcription factor controls survival and function of terminally differentiated conventional and plasmacytoid dendritic cells, respectively
D Sichien, CL Scott, L Martens, M Vanderkerken, S Van Gassen, ...
Immunity 45 (3), 626-640, 2016
882016
An immune clock of human pregnancy
N Aghaeepour, EA Ganio, D Mcilwain, AS Tsai, M Tingle, S Van Gassen, ...
Science immunology 2 (15), eaan2946, 2017
722017
A benchmark for evaluation of algorithms for identification of cellular correlates of clinical outcomes
N Aghaeepour, P Chattopadhyay, M Chikina, T Dhaene, S Van Gassen, ...
Cytometry Part A 89 (1), 16-21, 2016
432016
Myeloid cell heterogeneity in cancer: not a single cell alike
M Kiss, S Van Gassen, K Movahedi, Y Saeys, D Laoui
Cellular Immunology 330, 188-201, 2018
402018
FloReMi: flow density survival regression using minimal feature redundancy
S Van Gassen, C Vens, T Dhaene, BN Lambrecht, Y Saeys
Cytometry Part A 89 (1), 22-29, 2016
222016
RORγt inhibition selectively targets IL-17 producing iNKT and γδ-T cells enriched in Spondyloarthritis patients
K Venken, P Jacques, C Mortier, ME Labadia, T Decruy, J Coudenys, ...
Nature communications 10 (1), 9, 2019
92019
Response to Orlova et al. “Science not art: statistically sound methods for identifying subsets in multi-dimensional flow and mass cytometry data sets”
Y Saeys, S Van Gassen, B Lambrecht
Nature Reviews Immunology 18 (1), 78, 2018
32018
Trabid epigenetically drives expression of IL-12 and IL-23
IS Afonina, R Beyaert
Nature immunology 17 (3), 227, 2016
22016
Unsupervised trajectory inference using graph mining
L De Baets, S Van Gassen, T Dhaene, Y Saeys
International Meeting on Computational Intelligence Methods forá…, 2015
22015
Complex aggregates over clusters of elements
C Vens, S Van Gassen, T Dhaene, Y Saeys
Inductive Logic Programming, 181-193, 2015
22015
Guidelines for the use of flow cytometry and cell sorting in immunological studies
A Cossarizza, HD Chang, A Radbruch, A Acs, D Adam, S Adam‐Klages, ...
European journal of immunology 49 (10), 1457-1973, 2019
12019
The ORMDL3 asthma susceptibility gene regulates systemic ceramide levels without altering key asthma features in mice
N Debeuf, A Zhakupova, R Steiner, S Van Gassen, K Deswarte, ...
Journal of Allergy and Clinical Immunology, 2019
12019
Stabilization of cytokine mRNAs in iNKT cells requires the serine-threonine kinase IRE1alpha
S Govindarajan, D Gaublomme, R Van der Cruyssen, E Verheugen, ...
Nature communications 9 (1), 5340, 2018
12018
CytoNorm: A Normalization Algorithm for Cytometry Data
S Van Gassen, B Gaudilliere, MS Angst, Y Saeys, N Aghaeepour
Cytometry Part A, 2019
2019
A human immune dysregulation syndrome characterized by severe hyperinflammation with a homozygous nonsense Roquin-1 mutation
SJ Tavernier, V Athanasopoulos, P Verloo, G Behrens, J Staal, ...
Nature communications 10 (1), 1-16, 2019
2019
Novel mass cytometry analysis identifies reciprocal changes in NKREG and CD4EM as the dominant early immune reconstitution signature associated with subsequent acute GVHD afterá…
J Aries, J Ball, S Charrot, M Mee, S Van Gassen, S Iqbal, J Gribben, ...
BONE MARROW TRANSPLANTATION 54, 117-118, 2019
2019
ROR╬ģt inhibition selectively targets IL-17 producing iNKT and ╬ģ╬ī-T cells enriched in Spondyloarthritis patients.
K Venken, P Jacques, C Mortier, ME Labadia, T Decruy, J Coudenys, ...
Nat Commun, 9-9, 2019
2019
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