Fabien Burki
TitleCited byYear
The Revised Classification of Eukaryotes
SM Adl, AGB Simpson, CE Lane, J Lukeš, D Bass, SS Bowser, MW Brown, ...
Journal of Eukaryotic Microbiology 59 (5), 429-514, 2012
13472012
The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): illuminating the functional diversity of eukaryotic life in the oceans through transcriptome sequencing
PJ Keeling, F Burki, HM Wilcox, B Allam, EE Allen, LA Amaral-Zettler, ...
PLoS biology 12 (6), e1001889, 2014
4692014
Phylogenomics reshuffles the eukaryotic supergroups
F Burki, K Shalchian-Tabrizi, M Minge, Å Skjæveland, SI Nikolaev, ...
PLoS One 2 (8), e790, 2007
4052007
Algal genomes reveal evolutionary mosaicism and the fate of nucleomorphs
BA Curtis, G Tanifuji, F Burki, A Gruber, M Irimia, S Maruyama, MC Arias, ...
Nature 492 (7427), 59, 2012
2962012
Phylogenomics reveals a new ‘megagroup’including most photosynthetic eukaryotes
F Burki, K Shalchian-Tabrizi, J Pawlowski
Biology letters 4 (4), 366-369, 2008
2722008
AIR: a batch-oriented web program package for construction of supermatrices ready for phylogenomic analyses
S Kumar, Å Skjæveland, RJS Orr, P Enger, T Ruden, BH Mevik, F Burki, ...
BMC bioinformatics 10 (1), 357, 2009
2502009
The Eukaryotic Tree of Life from a Global Phylogenomic Perspective
F Burki
Cold Spring Harbor Perspectives in Biology 6 (5), a016147, 2014
2312014
The evolutionary history of haptophytes and cryptophytes: phylogenomic evidence for separate origins
F Burki, N Okamoto, JF Pombert, PJ Keeling
Proceedings of the Royal Society B: Biological Sciences 279 (1736), 2246-2254, 2012
2282012
Birth and adaptive evolution of a hominoid gene that supports high neurotransmitter flux
F Burki, H Kaessmann
Nature genetics 36 (10), 1061, 2004
1902004
Large-scale phylogenomic analyses reveal that two enigmatic protist lineages, Telonemia and Centroheliozoa, are related to photosynthetic chromalveolates
F Burki, Y Inagaki, J Bråte, JM Archibald, PJ Keeling, T Cavalier-Smith, ...
Genome Biology and Evolution 1, 231-238, 2009
1562009
Untangling the early diversification of eukaryotes: a phylogenomic study of the evolutionary origins of Centrohelida, Haptophyta and Cryptista
F Burki, M Kaplan, DV Tikhonenkov, V Zlatogursky, BQ Minh, ...
Proceedings of the Royal Society B: Biological Sciences 283 (1823), 20152802, 2016
1462016
Untangling the Phylogeny of Amoeboid Protists
J Pawlowski, F Burki
Journal of Eukaryotic Microbiology 56 (1), 16-25, 2009
1382009
Evolution of Rhizaria: new insights from phylogenomic analysis of uncultivated protists
F Burki, A Kudryavtsev, MV Matz, GV Aglyamova, S Bulman, M Fiers, ...
BMC evolutionary biology 10 (1), 377, 2010
1142010
Factors mediating plastid dependency and the origins of parasitism in apicomplexans and their close relatives
J Janouškovec, DV Tikhonenkov, F Burki, AT Howe, M Kolísko, ...
Proceedings of the National Academy of Sciences 112 (33), 10200-10207, 2015
1012015
Evolutionary position of breviate amoebae and the primary eukaryote divergence
MA Minge, JD Silberman, RJS Orr, T Cavalier-Smith, K Shalchian-Tabrizi, ...
Proceedings of the Royal Society of London B: Biological Sciences 276 (1657 …, 2009
992009
Major transitions in dinoflagellate evolution unveiled by phylotranscriptomics
J Janouškovec, GS Gavelis, F Burki, D Dinh, TR Bachvaroff, SG Gornik, ...
Proceedings of the National Academy of Sciences 114 (2), E171-E180, 2017
922017
Revisions to the classification, nomenclature, and diversity of eukaryotes
SM Adl, D Bass, CE Lane, J Lukeš, CL Schoch, A Smirnov, S Agatha, ...
Journal of Eukaryotic Microbiology 66 (1), 4-119, 2019
882019
Collodictyon—an ancient lineage in the tree of eukaryotes
S Zhao, F Burki, J Bråte, PJ Keeling, D Klaveness, K Shalchian-Tabrizi
Molecular biology and evolution 29 (6), 1557-1568, 2012
882012
Identifying and Characterizing Alternative Molecular Markers for the Symbiotic and Free-Living Dinoflagellate Genus Symbiodinium
X Pochon, HM Putnam, F Burki, RD Gates
PloS one 7 (1), e29816, 2012
812012
Gain and loss of multiple functionally related, horizontally transferred genes in the reduced genomes of two microsporidian parasites
JF Pombert, M Selman, F Burki, FT Bardell, L Farinelli, LF Solter, ...
Proceedings of the National Academy of Sciences 109 (31), 12638-12643, 2012
752012
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Articles 1–20