Osmar Norberto de Souza - labio.osmarnds@gmail.com
Osmar Norberto de Souza - labio.osmarnds@gmail.com
Head, Trunk, & Limbs - Laboratory for Bioinformatics, Modelling and Simulation of Biosystems - LABIO
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Drugs that inhibit mycolic acid biosynthesis in Mycobacterium tuberculosis
EK Schroeder, O Norberto de Souza, DS Santos, JS Blanchard, LA Basso
Current Pharmaceutical Biotechnology 3 (3), 197-225, 2002
1882002
Effect of periodic box size on aqueous molecular dynamics simulation of a DNA dodecamer with particle-mesh Ewald method
O Norberto de Souza, RL Ornstein
Biophysical Journal 72 (6), 2395-2397, 1997
1121997
Determination of two structural forms of catalytic bridging ligand in zinc-phosphotriesterase by molecular dynamics simulation and quantum chemical calculation
CG Zhan, O Norberto de Souza, R Rittenhouse, RL Ornstein
Journal of the American Chemical Society 121 (32), 7279-7282, 1999
991999
Molecular dynamics simulations of a protein-protein dimer: particle-mesh Ewald electrostatic model yields far superior results to standard cutoff model
O Norberto de Souza, RL Ornstein
Journal of Biomolecular Structure and Dynamics 16 (6), 1205-1218, 1999
781999
Crystallographic and pre-steady-state kinetics studies on binding of NADH to wild-type and isoniazid-resistant enoyl-ACP (CoA) reductase enzymes from Mycobacterium tuberculosis.
JS Oliveira, JH Pereira, F Canduri, NC Rodrigues, O Norberto de Souza, ...
Journal of Molecular Biology 359 (3), 646-666, 2006
762006
Molecular Dynamics Simulation Studies of the Wild-Type, I21V, and I16T Mutants of Isoniazid-Resistant Mycobacterium tuberculosis Enoyl Reductase (InhA) in Complex with NADH …
EK Schroeder, LA Basso, DS Santos, O Norberto de Souza
Biophysical Journal 89 (2), 876-884, 2005
722005
Discovery of New Inhibitors of Mycobacterium tuberculosis InhA Enzyme using Virtual Screening and a 3D-Pharmacophore-Based Approach
I Pauli, RN Santos, DC Rostirolla, LK Martinelli, RG Ducati, ...
Journal of Chemical Information and Modeling, 2013
662013
Inherent DNA curvature and flexibility correlate with TATA box functionality
O Norberto de Souza, RL Ornstein
Biopolymers 46 (6), 403-415, 1998
551998
Slow-onset inhibition of 2-trans-enoyl-ACP (CoA) reductase from Mycobacterium tuberculosis by an inorganic complex
JS Oliveira, EHS de Sousa, O Norberto de Souza, DS Santos, LA Basso
Current Pharmaceutical Design 12 (19), 2409-2424, 2006
522006
Plasmodium falciparum histidine-rich protein II binds to actin, phosphatidylinositol 4, 5-bisphosphate and erythrocyte ghosts in a pH-dependent manner and undergoes coil-to …
CE Benedetti, J Kobarg, TA Pertinhez, RM Gatti, O Norberto de Souza, ...
Molecular and Biochemical Parasitology 128 (2), 157-166, 2003
362003
Protein Structure, Modelling and Applications
A Breda, NF Valadares, O Norberto de Souza, RC Garratt
National Center for Biotechnology Information (US), 2007
332007
A06. Protein Structure, Modelling and Applications
A Breda, NF Valadares, O Norberto de Souza, RC Garratt
Bioinformatics in Tropical Disease Research: A Practical and Case-Study …, 2007
33*2007
Effect of warmup protocol and sampling time on convergence of molecular dynamics simulations of a DNA dodecamer using AMBER 4.1 and particle-mesh Ewald method
O Norberto de Souza, RL Ornstein
Journal of Biomolecular Structure and Dynamics 14 (5), 607-611, 1997
331997
Molecular modeling of pathogenesis-related proteins of family 5
CE Thompson, CL Fernandes, O Norberto de Souza, FM Salzano, ...
Cell Biochemistry and Biophysics 44 (3), 385-394, 2006
292006
wFReDoW: A Cloud-based Web Environment to Handle Molecular Docking Simulations of a Fully-Flexible Receptor Model
R De Paris, FA Frantz, O Norberto de Souza, DDA Ruiz
BioMed Research International, 2013
272013
Sequence and structural aspects of the functional diversification of plant alcohol dehydrogenases
CE Thompson, FM Salzano, O Norberto de Souza, LB Freitas
Gene 396 (1), 108-115, 2007
262007
Mining flexible-receptor docking experiments to select promising protein receptor snapshots
KS Machado, AT Winck, DDA Ruiz, O Norberto de Souza
BMC Genomics 11 (Suppl 5), S6, 2010
252010
Clustering Molecular Dynamics Trajectories for Optimizing Docking Experiments
R De Paris, CV Quevedo, DD Ruiz, O Norberto de Souza, RC Barros
232015
Biochemical and Cellular Analysis of Human Variants of the DYT1 Dystonia Protein, TorsinA/TOR1A
J Hettich, SD Ryan, O Norberto de Souza, LFSM Timmers, S Tsai, ...
Human Mutation, 13 pages, 2014
232014
Automatic design of decision-tree induction algorithms tailored to flexible-receptor docking data
RC Barros, AT Winck, KS Machado, MP Basgalupp, AC de Carvalho, ...
BMC Bioinformatics 13 (1), 310, 2012
232012
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Artikelen 1–20