| Origins and evolution of microRNA genes in plant species M Nozawa, S Miura, M Nei Genome biology and evolution 4 (3), 230-239, 2012 | 202 | 2012 |
| Origins and evolution of microRNA genes in Drosophila species M Nozawa, S Miura, M Nei Genome biology and evolution 2, 180-189, 2010 | 111 | 2010 |
| Evolutionary changes of the target sites of two microRNAs encoded in the Hox gene cluster of Drosophila and other insect species S Miura, M Nozawa, M Nei Genome Biology and Evolution 3, 129-139, 2011 | 17 | 2011 |
| Predicting clone genotypes from tumor bulk sequencing of multiple samples S Miura, K Gomez, O Murillo, LA Huuki, T Vu, T Buturla, S Kumar Bioinformatics 34 (23), 4017-4026, 2018 | 13 | 2018 |
| Somatic evolutionary timings of driver mutations K Gomez, S Miura, LA Huuki, BS Spell, JP Townsend, S Kumar BMC cancer 18 (1), 1-10, 2018 | 12 | 2018 |
| Computational enhancement of single-cell sequences for inferring tumor evolution S Miura, LA Huuki, T Buturla, T Vu, K Gomez, S Kumar Bioinformatics 34 (17), i917-i926, 2018 | 11 | 2018 |
| An evolutionary portrait of the progenitor SARS-CoV-2 and its dominant offshoots in COVID-19 pandemic S Kumar, Q Tao, S Weaver, M Sanderford, MA Caraballo-Ortiz, S Sharma, ... bioRxiv, 2020 | 8 | 2020 |
| Power and pitfalls of computational methods for inferring clone phylogenies and mutation orders from bulk sequencing data S Miura, T Vu, J Deng, T Buturla, O Oladeinde, J Choi, S Kumar Scientific reports 10 (1), 1-21, 2020 | 6 | 2020 |
| Random fluctuation of selection coefficients and the extent of nucleotide variation in human populations S Miura, Z Zhang, M Nei Proceedings of the National Academy of Sciences 110 (26), 10676-10681, 2013 | 6 | 2013 |
| A new method for inferring timetrees from temporally sampled molecular sequences S Miura, K Tamura, Q Tao, LA Huuki, SLK Pond, J Priest, J Deng, ... PLOS Computational Biology 16 (1), e1007046, 2020 | 4 | 2020 |
| Delineation of Tumor Migration Paths by Using a Bayesian Biogeographic Approach A Chroni, T Vu, S Miura, S Kumar Cancers 11 (12), 1880, 2019 | 2 | 2019 |
| PathFinder: Bayesian inference of clone migration histories in cancer S Kumar, A Chroni, K Tamura, M Sanderford, O Oladeinde, V Aly, T Vu, ... Bioinformatics 36 (Supplement_2), i675-i683, 2020 | 1 | 2020 |
| A new method for inferring timetrees from temporally sampled molecular sequences S Miura, K Tamura, SLK Pond, LA Huuki, J Priest, J Deng, S Kumar BioRxiv, 620187, 2019 | 1 | 2019 |
| Using disease-associated coding sequence variation to investigate functional compensation by human paralogous proteins S Miura, S Tate, S Kumar Evolutionary Bioinformatics 11, EBO. S30594, 2015 | 1 | 2015 |
| Origins and evolution of microRNA genes in plants M Nozawa, S Miura, M Nei Genes & Genetic Systems 85 (6), 398-398, 2010 | 1 | 2010 |
| Detection of late-arising driver mutations using multi-sample tumor sequencing data K Gomez, S Miura, S Kumar Cancer Research 77 (13 Supplement), 1573-1573, 2017 | | 2017 |
| A new method to infer clonal sequences and phylogenies from personal tumor genome profiles S Miura, K Gomez, O Murillo, S Kumar Cancer Research 77 (13 Supplement), 3591-3591, 2017 | | 2017 |
| Evolutionary changes of microRNA genes and the population dynamics of mutant genes in varying environments S Miura | | 2012 |
