Dan Davidi
Dan Davidi
Postodc, Harvard Medical School
Geverifieerd e-mailadres voor hms.harvard.edu
Titel
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Jaar
The moderately efficient enzyme: evolutionary and physicochemical trends shaping enzyme parameters
A Bar-Even, E Noor, Y Savir, W Liebermeister, D Davidi, DS Tawfik, ...
Biochemistry 50 (21), 4402-4410, 2011
7502011
Sugar synthesis from CO2 in Escherichia coli
N Antonovsky, S Gleizer, E Noor, Y Zohar, E Herz, U Barenholz, ...
Cell 166 (1), 115-125, 2016
2042016
Visual account of protein investment in cellular functions
W Liebermeister, E Noor, A Flamholz, D Davidi, J Bernhardt, R Milo
Proceedings of the National Academy of Sciences 111 (23), 8488-8493, 2014
1872014
Global characterization of in vivo enzyme catalytic rates and their correspondence to in vitro kcat measurements
D Davidi, E Noor, W Liebermeister, A Bar-Even, A Flamholz, K Tummler, ...
Proceedings of the National Academy of Sciences 113 (12), 3401-3406, 2016
1542016
An integrated open framework for thermodynamics of reactions that combines accuracy and coverage
E Noor, A Bar-Even, A Flamholz, Y Lubling, D Davidi, R Milo
Bioinformatics 28 (15), 2037-2044, 2012
1262012
The protein cost of metabolic fluxes: prediction from enzymatic rate laws and cost minimization
E Noor, A Flamholz, A Bar-Even, D Davidi, R Milo, W Liebermeister
PLoS computational biology 12 (11), e1005167, 2016
1002016
Noise in gene expression is coupled to growth rate
L Keren, D Van Dijk, S Weingarten-Gabbay, D Davidi, G Jona, ...
Genome Research 25 (12), 1893-1902, 2015
712015
Genome-wide SWAp-Tag yeast libraries for proteome exploration
U Weill, I Yofe, E Sass, B Stynen, D Davidi, J Natarajan, ...
Nature methods 15 (8), 617-622, 2018
672018
Revisiting trade-offs between Rubisco kinetic parameters
AI Flamholz, N Prywes, U Moran, D Davidi, YM Bar-On, LM Oltrogge, ...
Biochemistry 58 (31), 3365-3376, 2019
642019
A bird’s-eye view of enzyme evolution: Chemical, physicochemical, and physiological considerations
D Davidi, LM Longo, J Jabłońska, R Milo, DS Tawfik
Chemical reviews 118 (18), 8786-8797, 2018
532018
Design principles of autocatalytic cycles constrain enzyme kinetics and force low substrate saturation at flux branch points
U Barenholz, D Davidi, E Reznik, Y Bar-On, N Antonovsky, E Noor, R Milo
Elife 6, e20667, 2017
472017
Lessons on enzyme kinetics from quantitative proteomics
D Davidi, R Milo
Current opinion in biotechnology 46, 81-89, 2017
392017
Differential inhibition of α-synuclein oligomeric and fibrillar assembly in parkinson's disease model by cinnamon extract
R Shaltiel-Karyo, D Davidi, M Frenkel-Pinter, M Ovadia, D Segal, E Gazit
Biochimica et Biophysica Acta (BBA)-General Subjects 1820 (10), 1628-1635, 2012
352012
Assessment of GFP tag position on protein localization and growth fitness in yeast
U Weill, G Krieger, Z Avihou, R Milo, M Schuldiner, D Davidi
Journal of molecular biology 431 (3), 636-641, 2019
332019
The genetic basis for the adaptation of E. coli to sugar synthesis from CO 2
E Herz, N Antonovsky, Y Bar-On, D Davidi, S Gleizer, N Prywes, ...
Nature communications 8 (1), 1-10, 2017
252017
Highly active rubiscos discovered by systematic interrogation of natural sequence diversity
D Davidi, M Shamshoum, Z Guo, YM Bar‐On, N Prywes, A Oz, ...
The EMBO journal 39 (18), e104081, 2020
232020
A novel, sensitive assay for behavioral defects in Parkinson's disease model Drosophila
R Shaltiel-Karyo, D Davidi, Y Menuchin, M Frenkel-Pinter, ...
Parkinson’s disease 2012, 2012
212012
Chance and pleiotropy dominate genetic diversity in complex bacterial environments
L Noda-Garcia, D Davidi, E Korenblum, A Elazar, E Putintseva, A Aharoni, ...
Nature microbiology 4 (7), 1221-1230, 2019
92019
Amplicon residues in research laboratories masquerade as COVID-19 in surveillance tests
D Davidi, S Fitzgerald, HL Glaspell, S Jalbert, CM Klapperich, ...
Cell Reports Methods 1 (1), 100005, 2021
6*2021
Revisiting tradeoffs in Rubisco kinetic parameters
A Flamholz, N Prywes, U Moran, D Davidi, Y Bar-On, L Oltrogge, ...
bioRxiv, 470021, 2018
52018
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Artikelen 1–20