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Daniel J. Park
Daniel J. Park
Viral Genomics, Broad Institute of Harvard and MIT
Adresse e-mail validée de broadinstitute.org - Page d'accueil
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Genomic surveillance elucidates Ebola virus origin and transmission during the 2014 outbreak
SK Gire, A Goba, KG Andersen, RSG Sealfon, DJ Park, L Kanneh, ...
Science 345 (6202), 1369-1372, 2014
14942014
Outbreak of SARS-CoV-2 infections, including COVID-19 vaccine breakthrough infections, associated with large public gatherings—Barnstable County, Massachusetts, July 2021
CM Brown, J Vostok, H Johnson, M Burns, R Gharpure, S Sami, RT Sabo, ...
Morbidity and Mortality Weekly Report 70 (31), 1059, 2021
6322021
Clinical illness and outcomes in patients with Ebola in Sierra Leone
JS Schieffelin, JG Shaffer, A Goba, M Gbakie, SK Gire, A Colubri, ...
New england journal of medicine 371 (22), 2092-2100, 2014
6292014
Virus genomes reveal factors that spread and sustained the Ebola epidemic
G Dudas, LM Carvalho, T Bedford, AJ Tatem, G Baele, NR Faria, DJ Park, ...
Nature 544 (7650), 309-315, 2017
4322017
Zika virus evolution and spread in the Americas
HC Metsky, CB Matranga, S Wohl, SF Schaffner, CA Freije, SM Winnicki, ...
Nature 546 (7658), 411-415, 2017
4162017
Identifying recent adaptations in large-scale genomic data
SR Grossman, KG Andersen, I Shlyakhter, S Tabrizi, S Winnicki, A Yen, ...
Cell 152 (4), 703-713, 2013
4092013
Genetic diversity and protective efficacy of the RTS, S/AS01 malaria vaccine
DE Neafsey, M Juraska, T Bedford, D Benkeser, C Valim, A Griggs, ...
New England Journal of Medicine 373 (21), 2025-2037, 2015
4082015
Benchmarking Metagenomics Tools for Taxonomic Classification
HY Simon, KJ Siddle, DJ Park, PC Sabeti
Cell 178 (4), 779-794, 2019
3852019
Genomic epidemiology reveals multiple introductions of Zika virus into the United States
ND Grubaugh, JT Ladner, MUG Kraemer, G Dudas, AL Tan, ...
Nature, 2017
3602017
Ebola Virus Epidemiology, Transmission, and Evolution during Seven Months in Sierra Leone
DJ Park, G Dudas, S Wohl, A Goba, SLM Whitmer, KG Andersen, ...
Cell 161 (7), 1516-1526, 2015
3372015
Phylogenetic analysis of SARS-CoV-2 in Boston highlights the impact of superspreading events
JE Lemieux, KJ Siddle, BM Shaw, C Loreth, SF Schaffner, ...
Science 371 (6529), eabe3261, 2021
2502021
A general SNP-based molecular barcode for Plasmodium falciparum identification and tracking
R Daniels, SK Volkman, DA Milner, N Mahesh, DE Neafsey, DJ Park, ...
Malaria journal 7, 1-11, 2008
2412008
Population genomic sequencing of Coccidioides fungi reveals recent hybridization and transposon control
DE Neafsey, BM Barker, TJ Sharpton, JE Stajich, DJ Park, E Whiston, ...
Genome Research 20 (7), 938-946, 2010
2002010
A sequence-oriented comparison of gene expression measurements across different hybridization-based technologies
WP Kuo, F Liu, J Trimarchi, C Punzo, M Lombardi, J Sarang, ME Whipple, ...
Nature biotechnology 24 (7), 832-840, 2006
1922006
SNP genotyping defines complex gene-flow boundaries among African malaria vector mosquitoes
DE Neafsey, MKN Lawniczak, DJ Park, SN Redmond, MB Coulibaly, ...
Science 330 (6003), 514-517, 2010
1812010
Analysis of 6.4 million SARS-CoV-2 genomes identifies mutations associated with fitness
F Obermeyer, M Jankowiak, N Barkas, SF Schaffner, JD Pyle, ...
Science 376 (6599), 1327-1332, 2022
1722022
Genomic analysis of lassa virus during an increase in cases in nigeria in 2018
KJ Siddle, P Eromon, KG Barnes, S Mehta, JU Oguzie, I Odia, ...
New England Journal of Medicine 379 (18), 1745-1753, 2018
1702018
Use of high-density tiling microarrays to identify mutations globally and elucidate mechanisms of drug resistance in Plasmodium falciparum
NV Dharia, ABS Sidhu, MB Cassera, SJ Westenberger, SER Bopp, ...
Genome biology 10 (2), 1-13, 2009
1552009
Comparative transmissibility of SARS-CoV-2 variants delta and alpha in New England, USA
R Earnest, R Uddin, N Matluk, N Renzette, SE Turbett, KJ Siddle, C Loreth, ...
Cell Reports Medicine 3 (4), 2022
1502022
A global transcriptional analysis of Plasmodium falciparum malaria reveals a novel family of telomere-associated lncRNAs
KM Broadbent, D Park, AR Wolf, D Van Tyne, JS Sims, U Ribacke, ...
Genome biology 12 (6), 1-15, 2011
1422011
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