Samuel Angiuoli
Samuel Angiuoli
Chief Information Officer, Personal Genome Diagnostics
Geverifieerd e-mailadres voor personalgenome.com - Homepage
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Genome sequence of the human malaria parasite Plasmodium falciparum
MJ Gardner, N Hall, E Fung, O White, M Berriman, RW Hyman, JM Carlton, ...
Nature 419 (6906), 498-511, 2002
46602002
Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: implications for the microbial “pan-genome”
H Tettelin, V Masignani, MJ Cieslewicz, C Donati, D Medini, NL Ward, ...
Proceedings of the National Academy of Sciences 102 (39), 13950-13955, 2005
17382005
Complete genome sequence of a virulent isolate of Streptococcus pneumoniae
H Tettelin, KE Nelson, IT Paulsen, JA Eisen, TD Read, S Peterson, ...
Science 293 (5529), 498-506, 2001
14262001
Insights on evolution of virulence and resistance from the complete genome analysis of an early methicillin-resistant Staphylococcus aureus strain and a biofilm-producing …
SR Gill, DE Fouts, GL Archer, EF Mongodin, RT DeBoy, J Ravel, ...
Journal of bacteriology 187 (7), 2426-2438, 2005
11812005
The minimum information about a genome sequence (MIGS) specification
D Field, G Garrity, T Gray, N Morrison, J Selengut, P Sterk, T Tatusova, ...
Nature biotechnology 26 (5), 541-547, 2008
11462008
Comparative genomics of trypanosomatid parasitic protozoa
NM El-Sayed, PJ Myler, G Blandin, M Berriman, J Crabtree, G Aggarwal, ...
science 309 (5733), 404-409, 2005
8502005
Genome sequence and comparative analysis of the model rodent malaria parasite Plasmodium yoelii yoelii
JM Carlton, SV Angiuoli, BB Suh, TW Kooij, M Pertea, JC Silva, ...
Nature 419 (6906), 512-519, 2002
8322002
Comparative genomics of the neglected human malaria parasite Plasmodium vivax
JM Carlton, JH Adams, JC Silva, SL Bidwell, H Lorenzi, E Caler, ...
Nature 455 (7214), 757-763, 2008
8182008
Draft genome of the filarial nematode parasite Brugia malayi
E Ghedin, S Wang, D Spiro, E Caler, Q Zhao, J Crabtree, JE Allen, ...
Science 317 (5845), 1756-1760, 2007
6372007
Toward an online repository of standard operating procedures (SOPs) for (meta) genomic annotation
SV Angiuoli, A Gussman, W Klimke, G Cochrane, D Field, GM Garrity, ...
OMICS A Journal of Integrative Biology 12 (2), 137-141, 2008
5812008
Global phylogeny of Mycobacterium tuberculosis based on single nucleotide polymorphism (SNP) analysis: insights into tuberculosis evolution, phylogenetic accuracy of other DNA …
I Filliol, AS Motiwala, M Cavatore, W Qi, MH Hazbón, MB Del Valle, J Fyfe, ...
Journal of bacteriology 188 (2), 759-772, 2006
5122006
Whole genome comparisons of serotype 4b and 1/2a strains of the food‐borne pathogen Listeria monocytogenes reveal new insights into the core genome components of this species
KE Nelson, DE Fouts, EF Mongodin, J Ravel, RT DeBoy, JF Kolonay, ...
Nucleic acids research 32 (8), 2386-2395, 2004
5112004
Genomic islands in the pathogenic filamentous fungus Aspergillus fumigatus
ND Fedorova, N Khaldi, VS Joardar, R Maiti, P Amedeo, MJ Anderson, ...
PLoS Genet 4 (4), e1000046, 2008
4752008
Comparative genomics of emerging human ehrlichiosis agents
JCD Hotopp, M Lin, R Madupu, J Crabtree, SV Angiuoli, J Eisen, ...
PLoS Genet 2 (2), e21, 2006
4752006
Mugsy: fast multiple alignment of closely related whole genomes
SV Angiuoli, SL Salzberg
Bioinformatics 27 (3), 334-342, 2011
4132011
Direct detection of early-stage cancers using circulating tumor DNA
J Phallen, M Sausen, V Adleff, A Leal, C Hruban, J White, V Anagnostou, ...
Science translational medicine 9 (403), 2017
3712017
Genome sequence of Theileria parva, a bovine pathogen that transforms lymphocytes
MJ Gardner, R Bishop, T Shah, EP De Villiers, JM Carlton, N Hall, Q Ren, ...
Science 309 (5731), 134-137, 2005
3432005
The genome sequence of Bacillus cereus ATCC 10987 reveals metabolic adaptations and a large plasmid related to Bacillus anthracis pXO1
DA Rasko, J Ravel, OA Řkstad, E Helgason, RZ Cer, L Jiang, KA Shores, ...
Nucleic acids research 32 (3), 977-988, 2004
3402004
Structure and dynamics of the pan-genome of Streptococcus pneumoniae and closely related species
C Donati, NL Hiller, H Tettelin, A Muzzi, NJ Croucher, SV Angiuoli, ...
Genome biology 11 (10), R107, 2010
3372010
Personalized genomic analyses for cancer mutation discovery and interpretation
S Jones, V Anagnostou, K Lytle, S Parpart-Li, M Nesselbush, DR Riley, ...
Science translational medicine 7 (283), 283ra53-283ra53, 2015
3252015
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