| Evolutionary construction of multiple graph alignments for the structural analysis of biomolecules T Fober, M Mernberger, G Klebe, E Hüllermeier Bioinformatics 25 (16), 2110-2117, 2009 | 38 | 2009 |
| Fuzzy operator trees for modeling rating functions Y Yi, T Fober, E Hüllermeier International Journal of Computational Intelligence and Applications 8 (04 …, 2009 | 29 | 2009 |
| Superposition and alignment of labeled point clouds T Fober, G Glinca, G Klebe, E Hullermeier IEEE/ACM transactions on computational biology and bioinformatics 8 (6 …, 2011 | 23 | 2011 |
| Similarity measures for protein structures based on fuzzy histogram comparison T Fober, E Hüllermeier International conference on fuzzy systems, 1-7, 2010 | 18 | 2010 |
| Inductive bias E Hüllermeier, T Fober, M Mernberger Encyclopaedia of systems biology. Springer, New York, 2013 | 15 | 2013 |
| GARLig: a fully automated tool for subset selection of large fragment spaces via a self-adaptive genetic algorithm P Pfeffer, T Fober, E Hüllermeier, G Klebe Journal of chemical information and modeling 50 (9), 1644-1659, 2010 | 15 | 2010 |
| Extraction of protein binding pockets in close neighborhood of bound ligands makes comparisons simple due to inherent shape similarity T Krotzky, T Rickmeyer, T Fober, G Klebe Journal of chemical information and modeling 54 (11), 3229-3237, 2014 | 14 | 2014 |
| Extended graph-based models for enhanced similarity search in cavbase T Krotzky, T Fober, E Hüllermeier, G Klebe IEEE/ACM Transactions on Computational Biology and Bioinformatics 11 (5 …, 2014 | 13 | 2014 |
| GPU-based cloud computing for comparing the structure of protein binding sites M Leinweber, L Baumgärtner, M Mernberger, T Fober, E Hüllermeier, ... 2012 6th IEEE international conference on digital ecosystems and …, 2012 | 13 | 2012 |
| A linear-time algorithm for the aggregation and visualization of big spatial point data C Beilschmidt, T Fober, M Mattig, B Seeger Proceedings of the 25th ACM SIGSPATIAL International Conference on Advances …, 2017 | 10 | 2017 |
| CavSimBase: a database for large scale comparison of protein binding sites M Leinweber, T Fober, M Strickert, L Baumgärtner, G Klebe, B Freisleben, ... IEEE Transactions on Knowledge and Data Engineering 28 (6), 1423-1434, 2016 | 10 | 2016 |
| Graph‐based methods for protein structure comparison T Fober, M Mernberger, G Klebe, E Hüllermeier Wiley Interdisciplinary Reviews: Data Mining and Knowledge Discovery 3 (5 …, 2013 | 10 | 2013 |
| Fingerprint kernels for protein structure comparison T Fober, M Mernberger, G Klebe, E Hüllermeier Molecular Informatics 31 (6‐7), 443-452, 2012 | 10 | 2012 |
| Similarity analysis of protein binding sites: A generalization of the maximum common subgraph measure based on quasi-clique detection I Boukhris, Z Elouedi, T Fober, M Mernberger, E Hüllermeier 2009 Ninth International Conference on Intelligent Systems Design and …, 2009 | 9 | 2009 |
| Fuzzy Modeling of Labeled Point Cloud Superposition for the Comparison of Protein Binding Sites. T Fober, E Hüllermeier IFSA/EUSFLAT Conf., 1299-1304, 2009 | 9 | 2009 |
| Kernel-Based Cardinality Estimation on Metric Data. M Mattig, T Fober, C Beilschmidt, B Seeger EDBT, 349-360, 2018 | 8 | 2018 |
| Identification of functionally related enzymes by learning-to-rank methods M Stock, T Fober, E Hüllermeier, S Glinca, G Klebe, T Pahikkala, A Airola, ... IEEE/ACM Transactions on Computational Biology and Bioinformatics 11 (6 …, 2014 | 8 | 2014 |
| Local clique merging: An extension of the maximum common subgraph measure with applications in structural bioinformatics T Fober, G Klebe, E Hüllermeier Algorithms from and for Nature and Life: Classification and Data Analysis …, 2013 | 8 | 2013 |
| Extension and Empirical Comparison of Graph-Kernels for the Analysis of Protein Active Sites. T Fober, M Mernberger, V Melnikov, R Moritz, E Hüllermeier LWA, KDML:30-36, 2009 | 8 | 2009 |
| An efficient aggregation and overlap removal algorithm for circle maps C Beilschmidt, M Mattig, T Fober, B Seeger GeoInformatica 23, 473-498, 2019 | 7 | 2019 |
