| Cancer cell proliferation is inhibited by specific modulation frequencies JW Zimmerman, MJ Pennison, I Brezovich, N Yi, CT Yang, R Ramaker, ... British journal of cancer 106 (2), 307-313, 2012 | 189 | 2012 |
| Post-mortem molecular profiling of three psychiatric disorders RC Ramaker, KM Bowling, BN Lasseigne, MH Hagenauer, AA Hardigan, ... Genome medicine 9, 1-12, 2017 | 171 | 2017 |
| Occupancy maps of 208 chromatin-associated proteins in one human cell type EC Partridge, SB Chhetri, JW Prokop, RC Ramaker, CS Jansen, ST Goh, ... Nature 583 (7818), 720-728, 2020 | 93 | 2020 |
| RNA sequencing of pancreatic adenocarcinoma tumors yields novel expression patterns associated with long-term survival and reveals a role for ANGPTL4 MK Kirby, RC Ramaker, J Gertz, NS Davis, BE Johnston, PG Oliver, ... Molecular oncology 10 (8), 1169-1182, 2016 | 82 | 2016 |
| Genomic regulation of invasion by STAT3 in triple negative breast cancer JM McDaniel, KE Varley, J Gertz, DS Savic, BS Roberts, SK Bailey, ... Oncotarget 8 (5), 8226, 2017 | 74 | 2017 |
| Genome-wide DNA methylation measurements in prostate tissues uncovers novel prostate cancer diagnostic biomarkers and transcription factor binding patterns MK Kirby, RC Ramaker, BS Roberts, BN Lasseigne, DS Gunther, ... BMC cancer 17, 1-10, 2017 | 63 | 2017 |
| Characterization of coding/noncoding variants for SHROOM3 in patients with CKD JW Prokop, NC Yeo, C Ottmann, SB Chhetri, KL Florus, EJ Ross, ... Journal of the American Society of Nephrology 29 (5), 1525-1535, 2018 | 48 | 2018 |
| Distinct gene regulatory programs define the inhibitory effects of liver X receptors and PPARG on cancer cell proliferation D Savic, RC Ramaker, BS Roberts, EC Dean, TC Burwell, SK Meadows, ... Genome medicine 8, 1-16, 2016 | 44 | 2016 |
| Long-read genome sequencing for the molecular diagnosis of neurodevelopmental disorders SM Hiatt, JMJ Lawlor, LH Handley, RC Ramaker, BB Rogers, ... Human Genetics and Genomics Advances 2 (2), 2021 | 42 | 2021 |
| Differential stress induced c-Fos expression and identification of region-specific miRNA-mRNA networks in the dorsal raphe and amygdala of high-responder/low-responder rats JL Cohen, AE Ata, NL Jackson, EJ Rahn, RC Ramaker, S Cooper, ... Behavioural brain research 319, 110-123, 2017 | 40 | 2017 |
| Identification and function of enhancers in the human genome CJ Coppola, R C. Ramaker, EM Mendenhall Human molecular genetics 25 (R2), R190-R197, 2016 | 38 | 2016 |
| RNA sequencing-based cell proliferation analysis across 19 cancers identifies a subset of proliferation-informative cancers with a common survival signature RC Ramaker, BN Lasseigne, AA Hardigan, L Palacio, DS Gunther, ... Oncotarget 8 (24), 38668, 2017 | 37 | 2017 |
| aRNApipe: a balanced, efficient and distributed pipeline for processing RNA-seq data in high-performance computing environments A Alonso, BN Lasseigne, K Williams, J Nielsen, RC Ramaker, ... Bioinformatics 33 (11), 1727-1729, 2017 | 33 | 2017 |
| Population‐Specific Patterns of Epigenetic Defects in the B Cell Lineage in Patients With Systemic Lupus Erythematosus ME Breitbach, RC Ramaker, K Roberts, RP Kimberly, D Absher Arthritis & Rheumatology 72 (2), 282-291, 2020 | 30 | 2020 |
| CRISPR/Cas9-targeted removal of unwanted sequences from small-RNA sequencing libraries AA Hardigan, BS Roberts, DE Moore, RC Ramaker, AL Jones, RM Myers Nucleic acids research 47 (14), e84-e84, 2019 | 27 | 2019 |
| Kinase gene expression profiling of metastatic clear cell renal cell carcinoma tissue identifies potential new therapeutic targets P Ghatalia, ES Yang, BN Lasseigne, RC Ramaker, SJ Cooper, D Chen, ... PLoS One 11 (8), e0160924, 2016 | 23 | 2016 |
| Discovery and validation of circulating biomarkers of colorectal adenoma by high-depth small RNA sequencing BS Roberts, AA Hardigan, DE Moore, RC Ramaker, AL Jones, ... Clinical Cancer Research 24 (9), 2092-2099, 2018 | 21 | 2018 |
| De novo mutations in the GTP/GDP-binding region of RALA, a RAS-like small GTPase, cause intellectual disability and developmental delay SM Hiatt, MB Neu, RC Ramaker, AA Hardigan, JW Prokop, M Hancarova, ... PLoS Genetics 14 (11), e1007671, 2018 | 20 | 2018 |
| Pooled CRISPR screening in pancreatic cancer cells implicates co-repressor complexes as a cause of multiple drug resistance via regulation of epithelial-to-mesenchymal transition RC Ramaker, AA Hardigan, ER Gordon, CA Wright, RM Myers, SJ Cooper BMC cancer 21 (1), 1-13, 2021 | 17 | 2021 |
| Dissecting the regulatory activity and sequence content of loci with exceptional numbers of transcription factor associations RC Ramaker, AA Hardigan, ST Goh, EC Partridge, B Wold, SJ Cooper, ... Genome Research 30 (7), 939-950, 2020 | 14 | 2020 |
