Martin Krallinger

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Alfonso ValenciaICREA Professor. Barcelona Supercomputing Center.Adresse e-mail validée de bsc.es
Florian LeitnerData Catalytics, ION Analytics, IE UniversityAdresse e-mail validée de datacatalytics.com
Lynette HirschmanThe MITRE CorporationAdresse e-mail validée de mitre.org
Antonio Miranda-EscaladaSenior Data Scientist, LHF LabsAdresse e-mail validée de lhf.ai
Obdulia RabalCIMA - University of NavarraAdresse e-mail validée de unav.es
Marta VillegasBarcelona Supercomputing CenterAdresse e-mail validée de bsc.es
Ander IntxaurrondoResearcher at the Barcelona Supercomputing CenterAdresse e-mail validée de bsc.es
Miguel VazquezBarcelona Supercomputing Center - Spanish National HPCAdresse e-mail validée de bsc.es
Aitor Gonzalez-AgirreBarcelona Supercomputing Center (BSC)Adresse e-mail validée de bsc.es
Kevin Bretonnel CohenDirector, Biomedical Text Mining, U. Colorado School of MedicineAdresse e-mail validée de ucdenver.edu
Salvador Lima-LópezResearch Engineer, Barcelona Supercomputing CenterAdresse e-mail validée de bsc.es
Luis GascoBarcelona Supercomputing CenterAdresse e-mail validée de bsc.es
Cathy WuUniversity of DelawareAdresse e-mail validée de udel.edu
Anastasios NentidisNCSR "Demokritos", Greece & Aristotle University of Thessaloniki, GreeceAdresse e-mail validée de iit.demokritos.gr
Cecilia ArighiUniversity of DelawareAdresse e-mail validée de udel.edu
Eulàlia Farré-MaduellBarcelona Supercomputing CenterAdresse e-mail validée de bsc.es
Georgios PaliourasNational Center for Scientific Research "Demokritos", Athens, GreeceAdresse e-mail validée de iit.demokritos.gr
Anastasia KritharaPost-doctoral Researcher in National Center for Scientific Research "Demokritos", Athens, GreeceAdresse e-mail validée de iit.demokritos.gr
C Rodríguez-PenagosSenior Researcher at Barcelona Supercomputing CenterAdresse e-mail validée de bsc.es
Zhiyong LuDeputy Director for Literature Search, NCBI; Senior Investigator, NCBI-NLMAdresse e-mail validée de nih.gov

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Martin Krallinger

*Head of Natural Language Processing for Biomedical Information Analysis (NLP4BIA), Barcelona

Adresse e-mail validée de bsc.es - Page d'accueil

Biomedicine NLP text mining language models AI


Titre Trier par citations Trier par année Trier par titre	Citée par Citée par	Année
Overview of the protein-protein interaction annotation extraction task of BioCreative II M Krallinger, F Leitner, C Rodriguez-Penagos, A Valencia Genome biology 9, 1-19, 2008	343	2008
The CHEMDNER corpus of chemicals and drugs and its annotation principles M Krallinger, O Rabal, F Leitner, M Vazquez, D Salgado, Z Lu, R Leaman, ... Journal of cheminformatics 7 (1), 1-17, 2015	300	2015
Linking genes to literature: text mining, information extraction, and retrieval applications for biology M Krallinger, A Valencia, L Hirschman Genome biology 9 (2), 1-14, 2008	273	2008
Information retrieval and text mining technologies for chemistry M Krallinger, O Rabal, A Lourenco, J Oyarzabal, A Valencia Chemical reviews 117 (12), 7673-7761, 2017	265	2017
Text-mining and information-retrieval services for molecular biology M Krallinger, A Valencia Genome biology 6 (7), 1-8, 2005	260	2005
CHEMDNER: The drugs and chemical names extraction challenge M Krallinger, F Leitner, O Rabal, M Vazquez, J Oyarzabal, A Valencia Journal of cheminformatics 7 (1), 1-11, 2015	243	2015
Overview of the BioCreative VI chemical-protein interaction Track M Krallinger, O Rabal, SA Akhondi, M Pérez Pérez, J Santamaría, ... Proceedings of the sixth BioCreative challenge evaluation workshop 1, 141-146, 2017	241	2017
Evaluation of text-mining systems for biology: overview of the Second BioCreative community challenge M Krallinger, A Morgan, L Smith, F Leitner, L Tanabe, J Wilbur, ... Genome biology 9 (2), 1-9, 2008	232	2008
Text-mining approaches in molecular biology and biomedicine M Krallinger, RAA Erhardt, A Valencia Drug discovery today 10 (6), 439-445, 2005	210	2005
BioC: a minimalist approach to interoperability for biomedical text processing DC Comeau, R Islamaj Doğan, P Ciccarese, KB Cohen, M Krallinger, ... Database 2013, 2013	197	2013
The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text M Krallinger, M Vazquez, F Leitner, D Salgado, A Chatr-Aryamontri, ... BMC bioinformatics 12, 1-31, 2011	188	2011
Text mining for the biocuration workflow L Hirschman, GAP Burns, M Krallinger, C Arighi, KB Cohen, A Valencia, ... Database 2012, 2012	186	2012
Evaluation of BioCreAtIvE assessment of task 2 C Blaschke, EA Leon, M Krallinger, A Valencia BMC bioinformatics 6, 1-13, 2005	186	2005
An overview of BioCreative II. 5 F Leitner, SA Mardis, M Krallinger, G Cesareni, LA Hirschman, A Valencia IEEE/ACM Transactions on Computational Biology and Bioinformatics 7 (3), 385-399, 2010	139	2010
Overview of the CLEF eHealth evaluation lab 2020 L Goeuriot, H Suominen, L Kelly, A Miranda-Escalada, M Krallinger, Z Liu, ... International Conference of the Cross-Language Evaluation Forum for European …, 2020	134	2020
Text mining for biology-the way forward: opinions from leading scientists RB Altman, CM Bergman, J Blake, C Blaschke, A Cohen, F Gannon, ... Genome biology 9, 1-15, 2008	129	2008
Overview of the BioCreative III workshop CN Arighi, Z Lu, M Krallinger, KB Cohen, WJ Wilbur, A Valencia, ... BMC bioinformatics 12, 1-9, 2011	127	2011
Text mining for metabolic pathways, signaling cascades, and protein networks R Hoffmann, M Krallinger, E Andres, J Tamames, C Blaschke, A Valencia Science's STKE 2005 (283), pe21-pe21, 2005	121	2005
Analysis of biological processes and diseases using text mining approaches M Krallinger, F Leitner, A Valencia Bioinformatics Methods in Clinical Research, 341-382, 2010	107	2010
Text mining for drugs and chemical compounds: methods, tools and applications M Vazquez, M Krallinger, F Leitner, A Valencia Molecular Informatics 30 (6‐7), 506-519, 2011	103	2011

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