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Ruolin Liu
Ruolin Liu
The Eli and Edythe L. Broad Institute of MIT and Harvard
Geverifieerd e-mailadres voor broadinstitute.org
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Comparisons of computational methods for differential alternative splicing detection using RNA-seq in plant systems
R Liu, AE Loraine, JA Dickerson
BMC bioinformatics 15 (1), 1-16, 2014
1022014
Deep convolutional neural networks for accurate somatic mutation detection
SME Sahraeian, R Liu, B Lau, K Podesta, M Mohiyuddin, HYK Lam
Nature communications 10 (1), 1-10, 2019
682019
Transcriptomics of an extended phenotype: parasite manipulation of wasp social behaviour shifts expression of caste-related genes
AC Geffre, R Liu, F Manfredini, L Beani, J Kathirithamby, CM Grozinger, ...
Proceedings of the Royal Society B: Biological Sciences 284 (1852), 20170029, 2017
332017
Strawberry: Fast and accurate genome-guided transcript reconstruction and quantification from RNA-Seq
R Liu, J Dickerson
PLoS computational biology 13 (11), e1005851, 2017
262017
Massively parallel enrichment of low-frequency alleles enables duplex sequencing at low depth
G Gydush, E Nguyen, JH Bae, T Blewett, J Rhoades, SC Reed, D Shea, ...
Nature Biomedical Engineering 6 (3), 257-266, 2022
52022
Duplex-Repair enables highly accurate sequencing, despite DNA damage
K Xiong, D Shea, J Rhoades, T Blewett, R Liu, JH Bae, E Nguyen, ...
Nucleic acids research 50 (1), e1-e1, 2022
32022
MAESTRO affords ‘breadth and depth’for mutation testing
G Gydush, E Nguyen, JH Bae, J Rhoades, SC Reed, D Shea, K Xiong, ...
bioRxiv, 2021
32021
CODEC enables ‘single duplex’sequencing
JH Bae, R Liu, E Nguyen, J Rhoades, T Blewett, K Xiong, D Shea, ...
bioRxiv, 2021
1*2021
Massively-parallel enrichment of minor alleles for mutational testing via low-depth duplex sequencing
G Gydush, E Nguyen, JH Bae, T Blewett, J Rhoades, SC Reed, D Shea, ...
Nature biomedical engineering 6 (3), 257, 2022
2022
Transcript assembly, quantification and differential alternative splicing detection from RNA-Seq
R Liu
Iowa State University, 2017
2017
Computational methods for alternative splicing detection using RNA-seq
R Liu, J Dickerson
Proceedings of the International Conference on Bioinformatics, Computational …, 2013
2013
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Artikelen 1–11