JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework A Khan, O Fornes, A Stigliani, M Gheorghe, JA Castro-Mondragon, ... Nucleic acids research 46 (D1), D260-D266, 2018 | 916 | 2018 |
TF2Network: predicting transcription factor regulators and gene regulatory networks in Arabidopsis using publicly available binding site information SR Kulkarni, D Vaneechoutte, J Van de Velde, K Vandepoele Nucleic acids research 46 (6), e31-e31, 2018 | 53 | 2018 |
Functional characterization of the Arabidopsis transcription factor bZIP29 reveals its role in leaf and root development J Van Leene, J Blomme, SR Kulkarni, B Cannoot, N De Winne, ... Journal of experimental botany, erw347, 2016 | 32 | 2016 |
Inference of plant gene regulatory networks using data-driven methods: A practical overview SR Kulkarni, K Vandepoele Biochimica et Biophysica Acta (BBA)-Gene Regulatory Mechanisms 1863 (6), 194447, 2020 | 12 | 2020 |
Evolutionary relationships and expression analysis of EUL domain proteins in rice (Oryza sativa) K De Schutter, M Tsaneva, SR Kulkarni, P Rougé, K Vandepoele, ... Rice 10 (1), 26, 2017 | 11 | 2017 |
Enhanced maps of transcription factor binding sites improve regulatory networks learned from accessible chromatin data SR Kulkarni, DM Jones, K Vandepoele Plant physiology 181 (2), 412-425, 2019 | 9 | 2019 |
GSyellow, a multifaceted tag for functional protein analysis in monocot and dicot plants N Besbrugge, J Van Leene, D Eeckhout, B Cannoot, SR Kulkarni, ... Plant physiology 177 (2), 447-464, 2018 | 7 | 2018 |
Comparative transcriptomics enables the identification of functional orthologous genes involved in early leaf growth J Vercruysse, M Van Bel, CM Osuna‐Cruz, SR Kulkarni, V Storme, ... Plant biotechnology journal 18 (2), 553-567, 2020 | 3 | 2020 |
AUTHOR CONTRIBUTIONS 19 SR Kulkarni, DM Jones, K Vandepoele | | 2019 |
Enhanced TF binding site maps improve regulatory networks learned from accessible chromatin data SR Kulkarni, DM Jones, K Vandepoele bioRxiv, 545780, 2019 | | 2019 |
Delineating gene regulatory networks in Arabidopsis thaliana SR Kulkarni Ghent University, 2019 | | 2019 |
JASPAR: an open-access database of transcription factor binding profiles A Khan, O Fornes, A Stigliani, M Gheorghe, JA Castro-Mondragon, ... F1000Research 7, 2018 | | 2018 |
Erratum: JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework A Khan, O Fornes, A Stigliani, M Gheorghe, JA Castro-Mondragon, ... Oxford University Press, 0 | | |