| An essential cell cycle regulation gene causes hybrid inviability in Drosophila N Phadnis, ECP Baker, JC Cooper, KA Frizzell, E Hsieh, AFA de la Cruz, ... Science 350 (6267), 1552-1555, 2015 | 67 | 2015 |
| Roles of C/EBP class bZip proteins in the growth and cell competition of Rp (‘Minute’) mutants in Drosophila J Blanco, JC Cooper, NE Baker Elife 9, e50535, 2020 | 38 | 2020 |
| Recurrent losses and rapid evolution of the condensin II complex in insects TD King, CJ Leonard, JC Cooper, S Nguyen, EF Joyce, N Phadnis Molecular biology and evolution 36 (10), 2195-2204, 2019 | 30 | 2019 |
| Parallel Evolution of Sperm Hyper-Activation Ca2+ Channels JC Cooper, N Phadnis Genome biology and evolution 9 (7), 1938-1949, 2017 | 16 | 2017 |
| A genomic approach to identify hybrid incompatibility genes JC Cooper, N Phadnis Fly 10 (3), 142-148, 2016 | 13 | 2016 |
| Altered Localization of Hybrid Incompatibility Proteins in Drosophila JC Cooper, A Lukacs, S Reich, T Schauer, A Imhof, N Phadnis Molecular biology and evolution 36 (8), 1783-1792, 2019 | 9 | 2019 |
| A triple-hybrid cross reveals new a hybrid incompatibility locus between D. melanogaster and D. sechellia JC Cooper, P Guo, J Bladen, N Phadnis bioRxiv, 590588, 2019 | 6 | 2019 |
| Altered chromatin localization of hybrid lethality proteins in Drosophila JC Cooper, A Lukacs, S Reich, T Schauer, A Imhof, N Phadnis bioRxiv, 438432, 2018 | 3 | 2018 |
| Mapping biology with a unified representation space for genomic and chemical perturbations to enable accelerated drug discovery AS Blucher, S Celik, JD Jensen, J Taylor, MF Cuccarese, JC Cooper, ... Learning Meaningful Representation of Life Workshop at NeurIPS, 2021 | 2 | 2021 |
| A new hybrid incompatibility locus between D. melanogaster and D. sechellia J Bladen, JC Cooper, JT Ridges, P Guo, N Phadnis Genetics, iyae001, 2024 | 1 | 2024 |
| Endless Conflicts: Detecting Molecular Arms Races in Mammalian Genomes JC Cooper, CJ Leonard, BS Pedersen, CM Carey, AR Quinlan, NC Elde, ... bioRxiv, 685321, 2019 | 1 | 2019 |
| Crispr guide selection J Jensen, T Dahlem, H Sarah, J Cooper, S Schreier, I Quigley, I Haque, ... US Patent App. 17/585,660, 2022 | | 2022 |
| Identification and optimization of novel small molecule modulators of immune checkpoint resistance with a unified representation space for genomic and chemical perturbations A Bhandari, MF Cuccarese, K Fales, K Nadella, RS Basso, D Beshnova, ... Cancer Research 82 (12), 2022 | | 2022 |
| High throughput gene editing system and method J Cooper, J Jensen, T Dahlem US Patent App. 17/101,545, 2022 | | 2022 |
| The Molecular Basis of Hybrid Incompatibility and Detecting Recurrent Positive Selection in Genomic Data JC Cooper The University of Utah, 2019 | | 2019 |
