Bin Hu
Cited by
Cited by
A multi-algorithm, multi-timescale method for cell simulation
K Takahashi, K Kaizu, B Hu, M Tomita
Bioinformatics 20 (4), 538-546, 2004
Pathogen comparative genomics in the next-generation sequencing era: genome alignments, pangenomics and metagenomics
B Hu, G Xie, CC Lo, SR Starkenburg, PSG Chain
Briefings in functional genomics 10 (6), 322-333, 2011
Guidelines for visualizing and annotating rule-based models
LA Chylek, B Hu, ML Blinov, T Emonet, JR Faeder, B Goldstein, ...
Molecular BioSystems 7 (10), 2779-2795, 2011
Modeling Hsp70-mediated protein folding
B Hu, MP Mayer, M Tomita
Biophysical journal 91 (2), 496-507, 2006
Functionalization-dependent induction of cellular survival pathways by CdSe quantum dots in primary normal human bronchial epithelial cells
A Nagy, JA Hollingsworth, B Hu, A Steinbrück, PC Stark, C Rios Valdez, ...
ACS nano 7 (10), 8397-8411, 2013
SBML Level 3: an extensible format for the exchange and reuse of biological models
SM Keating, D Waltemath, M König, F Zhang, A Dräger, C Chaouiya, ...
Molecular systems biology 16 (8), e9110, 2020
Hierarchical graphs for rule-based modeling of biochemical systems
NW Lemons, B Hu, WS Hlavacek
BMC bioinformatics 12 (1), 1-13, 2011
GetBonNie for building, analyzing and sharing rule-based models
B Hu, G Matthew Fricke, JR Faeder, RG Posner, WS Hlavacek
Bioinformatics 25 (11), 1457-1460, 2009
Molecular dissection of induced platinum resistance through functional and gene expression analysis in a cell culture model of bladder cancer
S Wang, H Zhang, TM Scharadin, M Zimmermann, B Hu, AW Pan, ...
PloS one 11 (1), e0146256, 2016
SBML level 3 package: multistate, multicomponent and multicompartment species, version 1, release 1
F Zhang, M Meier-Schellersheim
Journal of integrative bioinformatics 15 (1), 2018
Functional and Structural Analysis of a Highly-Expressed Yersinia pestis Small RNA following Infection of Cultured Macrophages
N Li, SP Hennelly, CJ Stubben, S Micheva-Viteva, B Hu, Y Shou, ...
PloS one 11 (12), e0168915, 2016
The National Microbiome Data Collaborative: enabling microbiome science
EM Wood-Charlson, D Auberry, H Blanco, MI Borkum, YE Corilo, ...
Nature Reviews Microbiology 18 (6), 313-314, 2020
The Hsp70 chaperone system maintains high concentrations of active proteins and suppresses ATP consumption during heat shock
B Hu, M Tomita
Systems and synthetic biology 1 (1), 47-58, 2007
Introduction to systems biology
B Hu, PK Dhar
Systems and Synthetic Biology, 3-23, 2015
Estimating the probability of polyreactive antibodies 4E10 and 2F5 disabling a gp41 trimer after T cell-HIV adhesion
B Hu, HX Liao, SM Alam, B Goldstein
PLoS Comput Biol 10 (1), e1003431, 2014
Targeted metagenomics for clinical detection and discovery of bacterial tick-borne pathogens
L Kingry, S Sheldon, S Oatman, B Pritt, M Anacker, J Bjork, D Neitzel, ...
Journal of Clinical Microbiology 58 (11), 2020
DNA adenine methylase, not the PstI restriction-modification system, regulates virulence gene expression in Shiga toxin-producing Escherichia coli
MQ Carter, A Pham, S Huynh, CT Parker, A Miller, X He, B Hu, PSG Chain
Food Microbiology 96, 103722, 2021
EDGE COVID-19: a web platform to generate submission-ready genomes for SARS-CoV-2 sequencing efforts
CC Lo, M Shakya, K Davenport, M Flynn, J Gans, B Hu, PE Li, EP Jackson, ...
arXiv preprint arXiv:2006.08058, 2020
A public website for the automated assessment and validation of SARS-CoV-2 diagnostic PCR assays
PE Li, K Davenport, M Flynn, B Hu, CC Lo, EP Jackson, M Shakya, Y Xu, ...
arXiv preprint arXiv:2006.04566, 2020
Development of a new barcode-based, multiplex-PCR, next-generation-sequencing assay and data processing and analytical pipeline for multiplicity of infection detection of …
RM Mitchell, Z Zhou, M Sheth, S Sergent, M Frace, V Nayak, B Hu, ...
Malaria journal 20 (1), 1-16, 2021
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Articles 1–20