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Bin Ma
Bin Ma
Professor of Computer Science, University of Waterloo
Verified email at uwaterloo.ca
Title
Cited by
Cited by
Year
Initial sequencing and comparative analysis of the mouse genome
European Bioinformatics Institute: Birney Ewan 3 Goldman Nick 3 Kasprzyk ...
Nature 420 (6915), 520-562, 2002
80302002
Genome sequence of the Brown Norway rat yields insights into mammalian evolution
University of Utah Weiss Robert B. 14 Dunn Diane M. 14, ...
Nature 428 (6982), 493-521, 2004
24232004
The similarity metric
M Li, X Chen, X Li, B Ma, PMB Vitányi
IEEE transactions on Information Theory 50 (12), 3250-3264, 2004
15042004
PEAKS: powerful software for peptide de novo sequencing by tandem mass spectrometry
B Ma, K Zhang, C Hendrie, C Liang, M Li, A Doherty‐Kirby, G Lajoie
Rapid communications in mass spectrometry 17 (20), 2337-2342, 2003
14562003
PatternHunter: faster and more sensitive homology search
B Ma, J Tromp, M Li
Bioinformatics 18 (3), 440-445, 2002
10672002
PEAKS DB: De Novo sequencing assisted database search for sensitive and accurate peptide identification
J Zhang, L Xin, B Shan, W Chen, M Xie, D Yuen, W Zhang, Z Zhang, ...
Molecular & Cellular Proteomics, 2011
9402011
ZOOM! Zillions of oligos mapped
H Lin, Z Zhang, MQ Zhang, B Ma, M Li
Bioinformatics 24 (21), 2431-2437, 2008
3082008
Distinguishing string selection problems
JK Lanctot, M Li, B Ma, S Wang, L Zhang
Information and Computation 185 (1), 41-55, 2003
3002003
DNACompress: fast and effective DNA sequence compression
X Chen, M Li, B Ma, J Tromp
Bioinformatics 18 (12), 1696-1698, 2002
3002002
PatternHunter II: Highly sensitive and fast homology search
M Li, B Ma, D Kisman, J Tromp
Journal of bioinformatics and computational biology 2 (03), 417-439, 2004
2912004
SPIDER: software for protein identification from sequence tags with de novo sequencing error
Y Han, B Ma, K Zhang
Proceedings. 2004 IEEE Computational Systems Bioinformatics Conference, 2004 …, 2004
2752004
A general edit distance between RNA structures
T Jiang, G Lin, B Ma, K Zhang
Journal of computational biology 9 (2), 371-388, 2002
2642002
On the closest string and substring problems
M Li, B Ma, L Wang
Journal of the ACM (JACM) 49 (2), 157-171, 2002
2542002
From gene trees to species trees
B Ma, M Li, L Zhang
SIAM Journal on Computing 30 (3), 729-752, 2000
1972000
De novo sequencing and homology searching
B Ma, R Johnson
Molecular & cellular proteomics 11 (2), 2012
1892012
Finding similar regions in many strings
M Li, B Ma, L Wang
Proceedings of the thirty-first annual ACM symposium on Theory of computing …, 1999
1751999
Novor: real-time peptide de novo sequencing software
B Ma
Journal of the American Society for Mass Spectrometry 26 (11), 1885-1894, 2015
1732015
Chain letters and evolutionary histories
CH Bennett, M Li, B Ma
SCIENTIFIC AMERICAN-AMERICAN EDITION- 288 (6), 76-81, 2003
1712003
On spaced seeds for similarity search
U Keich, M Li, B Ma, J Tromp
Discrete applied mathematics 138 (3), 253-263, 2004
1702004
PeaksPTM: mass spectrometry-based identification of peptides with unspecified modifications
X Han, L He, L Xin, B Shan, B Ma
Journal of proteome research 10 (7), 2930-2936, 2011
1552011
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