| The systems biology graphical notation NL Novère, M Hucka, H Mi, S Moodie, F Schreiber, A Sorokin, E Demir, ... Nature biotechnology 27 (8), 735-741, 2009 | 1060 | 2009 |
| BioModels Database: a free, centralized database of curated, published, quantitative kinetic models of biochemical and cellular systems N Le Novere, B Bornstein, A Broicher, M Courtot, M Donizelli, H Dharuri, ... Nucleic acids research 34 (suppl_1), D689-D691, 2006 | 989 | 2006 |
| Can yeast glycolysis be understood in terms of in vitro kinetics of the constituent enzymes? Testing biochemistry B Teusink, J Passarge, CA Reijenga, E Esgalhado, CC Van der Weijden, ... European journal of biochemistry 267 (17), 5313-5329, 2000 | 913 | 2000 |
| Minimum information requested in the annotation of biochemical models (MIRIAM) NL Novère, A Finney, M Hucka, US Bhalla, F Campagne, J Collado-Vides, ... Nature biotechnology 23 (12), 1509-1515, 2005 | 711 | 2005 |
| BioModels Database: An enhanced, curated and annotated resource for published quantitative kinetic models C Li, M Donizelli, N Rodriguez, H Dharuri, L Endler, V Chelliah, L Li, E He, ... BMC systems biology 4, 1-14, 2010 | 697 | 2010 |
| The Steady-State Internal Redox State (NADH/NAD) Reflects the External Redox State and Is Correlated with Catabolic Adaptation in Escherichia coli MR De Graef, S Alexeeva, JL Snoep, MJ Teixeira de Mattos Journal of bacteriology 181 (8), 2351-2357, 1999 | 414 | 1999 |
| Web-based kinetic modelling using JWS Online BG Olivier, JL Snoep Bioinformatics 20 (13), 2143-2144, 2004 | 413 | 2004 |
| The Glycolytic Flux in Escherichia coli Is Controlled by the Demand for ATP BJ Koebmann, HV Westerhoff, JL Snoep, D Nilsson, PR Jensen Journal of bacteriology 184 (14), 3909-3916, 2002 | 408 | 2002 |
| Reproducible computational biology experiments with SED-ML-the simulation experiment description markup language D Waltemath, R Adams, FT Bergmann, M Hucka, F Kolpakov, AK Miller, ... BMC systems biology 5, 1-10, 2011 | 300 | 2011 |
| Metabolic engineering of lactic acid bacteria, the combined approach: kinetic modelling, metabolic control and experimental analysis MHN Hoefnagel, MJC Starrenburg, DE Martens, J Hugenholtz, ... Microbiology 148 (4), 1003-1013, 2002 | 259 | 2002 |
| Isolation, characterization, and physiological role of the pyruvate dehydrogenase complex and alpha-acetolactate synthase of Lactococcus lactis subsp. lactis bv. diacetylactis JL Snoep, MJ Teixeira de Mattos, MJ Starrenburg, J Hugenholtz Journal of Bacteriology 174 (14), 4838-4841, 1992 | 186 | 1992 |
| Construction and Characterization of an Effector Strain of Streptococcus mutans for Replacement Therapy of Dental Caries JD Hillman, TA Brooks, SM Michalek, CC Harmon, JL Snoep, ... Infection and immunity 68 (2), 543-549, 2000 | 180 | 2000 |
| Minimum information about a simulation experiment (MIASE) D Waltemath, R Adams, DA Beard, FT Bergmann, US Bhalla, R Britten, ... PLoS computational biology 7 (4), e1001122, 2011 | 171 | 2011 |
| Towards building the silicon cell: a modular approach JL Snoep, F Bruggeman, BG Olivier, HV Westerhoff Biosystems 83 (2-3), 207-216, 2006 | 169 | 2006 |
| Transduction of intracellular and intercellular dynamics in yeast glycolytic oscillations J Wolf, J Passarge, OJG Somsen, JL Snoep, R Heinrich, HV Westerhoff Biophysical Journal 78 (3), 1145-1153, 2000 | 156 | 2000 |
| Role of Hexose Transport in Control of Glycolytic Flux in Saccharomyces cerevisiae K Elbing, C Larsson, RM Bill, E Albers, JL Snoep, E Boles, S Hohmann, ... Applied and environmental microbiology 70 (9), 5323-5330, 2004 | 155 | 2004 |
| Identifiers for the 21st century: How to design, provision, and reuse persistent identifiers to maximize utility and impact of life science data JA McMurry, N Juty, N Blomberg, T Burdett, T Conlin, N Conte, M Courtot, ... PLoS biology 15 (6), e2001414, 2017 | 151 | 2017 |
| Protein burden in Zymomonas mobilis: negative flux and growth control due to overproduction of glycolytic enzymes JL Snoep, LP Yomano, HV Westerhoff, LO Ingram Microbiology 141 (9), 2329-2337, 1995 | 150 | 1995 |
| SEEK: a systems biology data and model management platform K Wolstencroft, S Owen, O Krebs, Q Nguyen, NJ Stanford, M Golebiewski, ... BMC systems biology 9, 1-12, 2015 | 135 | 2015 |
| DNA supercoiling in Escherichia coli is under tight and subtle homeostatic control, involving gene‐expression and metabolic regulation of both topoisomerase I … JL Snoep, CC van der Weijden, HW Andersen, HV Westerhoff, PR Jensen European Journal of Biochemistry 269 (6), 1662-1669, 2002 | 129 | 2002 |
