Toni Gabaldon
Toni Gabaldon
Group Leader, Institute for Research in Biomedicine (IRB) and Barcelona Supercomputing Centre (BSC)
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trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses
S Capella-Gutiérrez, JM Silla-Martínez, T Gabaldón
Bioinformatics 25 (15), 1972-1973, 2009
Whole-genome analyses resolve early branches in the tree of life of modern birds
ED Jarvis, S Mirarab, AJ Aberer, B Li, P Houde, C Li, SYW Ho, ...
Science 346 (6215), 1320-1331, 2014
Genome sequence of the pea aphid Acyrthosiphon pisum
International Aphid Genomics Consortium
PLoS biology 8 (2), e1000313, 2010
The genome of melon (Cucumis melo L.)
J Garcia-Mas, A Benjak, W Sanseverino, M Bourgeois, G Mir, ...
Proceedings of the National Academy of Sciences 109 (29), 11872-11877, 2012
ETE: a python Environment for Tree Exploration
J Huerta-Cepas, J Dopazo, T Gabaldón
BMC bioinformatics 11 (1), 24, 2010
eggNOG v4. 0: nested orthology inference across 3686 organisms
S Powell, K Forslund, D Szklarczyk, K Trachana, A Roth, J Huerta-Cepas, ...
Nucleic acids research 42 (D1), D231-D239, 2014
Immunity and other defenses in pea aphids, Acyrthosiphon pisum
NM Gerardo, B Altincicek, C Anselme, H Atamian, SM Barribeau, ...
Genome biology 11 (2), R21, 2010
Synonymous mutations frequently act as driver mutations in human cancers
F Supek, B Miñana, J Valcárcel, T Gabaldón, B Lehner
Cell 156 (6), 1324-1335, 2014
The genome of the recently domesticated crop plant sugar beet (Beta vulgaris)
JC Dohm, AE Minoche, D Holtgräwe, S Capella-Gutiérrez, F Zakrzewski, ...
Nature 505 (7484), 546, 2014
Functional and evolutionary implications of gene orthology
T Gabaldón, EV Koonin
Nature Reviews Genetics 14 (5), 360, 2013
An anaerobic mitochondrion that produces hydrogen
B Boxma, RM de Graaf, GWM van der Staay, TA van Alen, G Ricard, ...
Nature 434 (7029), 74, 2005
Tracing the evolution of a large protein complex in the eukaryotes, NADH: ubiquinone oxidoreductase (Complex I)
T Gabaldón, D Rainey, MA Huynen
Journal of molecular biology 348 (4), 857-870, 2005
Genome structure and metabolic features in the red seaweed Chondrus crispus shed light on evolution of the Archaeplastida
J Collén, B Porcel, W Carré, SG Ball, C Chaparro, T Tonon, T Barbeyron, ...
Proceedings of the National Academy of Sciences 110 (13), 5247-5252, 2013
Reconstruction of the proto-mitochondrial metabolism
T Gabaldón, MA Huynen
Science 301 (5633), 609-609, 2003
The i5K Initiative: advancing arthropod genomics for knowledge, human health, agriculture, and the environment
i5K Consortium
Journal of Heredity 104 (5), 595-600, 2013
An expanded evaluation of protein function prediction methods shows an improvement in accuracy
Y Jiang, TR Oron, WT Clark, AR Bankapur, D D’Andrea, R Lepore, ...
Genome biology 17 (1), 184, 2016
Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs
RE Green, EL Braun, J Armstrong, D Earl, N Nguyen, G Hickey, ...
Science 346 (6215), 1254449, 2014
The human phylome
J Huerta-Cepas, H Dopazo, J Dopazo, T Gabaldón
Genome biology 8 (6), R109, 2007
Origin and evolution of the peroxisomal proteome
T Gabaldón, B Snel, F Van Zimmeren, W Hemrika, H Tabak, MA Huynen
Biology Direct 1 (1), 8, 2006
Large-scale assignment of orthology: back to phylogenetics?
T Gabaldón
Genome biology 9 (10), 235, 2008
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Artikelen 1–20