Samantha Lycett
Samantha Lycett
Roslin Institiute, University of Edinburgh
Verified email at ed.ac.uk - Homepage
Title
Cited by
Cited by
Year
Origins and evolutionary genomics of the 2009 swine-origin H1N1 influenza A epidemic
GJD Smith, D Vijaykrishna, J Bahl, SJ Lycett, M Worobey, OG Pybus, ...
Nature 459 (7250), 1122-1125, 2009
21412009
The genesis and source of the H7N9 influenza viruses causing human infections in China
TTY Lam, J Wang, Y Shen, B Zhou, L Duan, CL Cheung, C Ma, SJ Lycett, ...
Nature 502 (7470), 241-244, 2013
4072013
Transmission network parameters estimated from HIV sequences for a nationwide epidemic
AJ Leigh Brown, SJ Lycett, L Weinert, GJ Hughes, E Fearnhill, DT Dunn
Journal of Infectious Diseases 204 (9), 1463-1469, 2011
1862011
Molecular phylodynamics of the heterosexual HIV epidemic in the United Kingdom
GJ Hughes, E Fearnhill, D Dunn, SJ Lycett, A Rambaut, AJL Brown, ...
PLoS pathogens 5 (9), 2009
1752009
Automated analysis of phylogenetic clusters
M Ragonnet-Cronin, E Hodcroft, S Hué, E Fearnhill, V Delpech, ...
BMC bioinformatics 14 (1), 317, 2013
1732013
Time resolved study of self‐assembled InAs quantum dots
H Yu, S Lycett, C Roberts, R Murray
Applied Physics Letters 69 (26), 4087-4089, 1996
1551996
Fast dating using least-squares criteria and algorithms
TH To, M Jung, S Lycett, O Gascuel
Systematic biology 65 (1), 82-97, 2016
1362016
Role for migratory wild birds in the global spread of avian influenza H5N8
SJ Lycett, R Bodewes, A Pohlmann, J Banks, K Bányai, MF Boni, ...
Science 354 (6309), 2016
1122016
Supersize me: how whole-genome sequencing and big data are transforming epidemiology
RR Kao, DT Haydon, SJ Lycett, PR Murcia
Trends in microbiology 22 (5), 282-291, 2014
992014
Reassortment patterns of avian influenza virus internal segments among different subtypes
L Lu, SJ Lycett, AJL Brown
BMC evolutionary biology 14 (1), 16, 2014
682014
The short stalk length of highly pathogenic avian influenza H5N1 virus neuraminidase limits transmission of pandemic H1N1 virus in ferrets
D Blumenkrantz, KL Roberts, H Shelton, S Lycett, WS Barclay
Journal of virology 87 (19), 10539-10551, 2013
632013
Phylogenetic analyses reveal HIV-1 infections between men misclassified as heterosexual transmissions
S Hué, AE Brown, M Ragonnet-Cronin, SJ Lycett, DT Dunn, E Fearnhill, ...
Aids 28 (13), 1967-1975, 2014
602014
Reassortment between influenza B lineages and the emergence of a coadapted PB1–PB2–HA gene complex
G Dudas, T Bedford, S Lycett, A Rambaut
Molecular biology and evolution 32 (1), 162-172, 2015
592015
Detection of mammalian virulence determinants in highly pathogenic avian influenza H5N1 viruses: multivariate analysis of published data
SJ Lycett, MJ Ward, FI Lewis, AFY Poon, SLK Pond, AJL Brown
Journal of virology 83 (19), 9901-9910, 2009
582009
Estimating reassortment rates in co-circulating Eurasian swine influenza viruses
SJ Lycett, G Baillie, E Coulter, S Bhatt, P Kellam, JW McCauley, ...
The Journal of general virology 93 (Pt 11), 2326, 2012
502012
The effect of the PB2 mutation 627K on highly pathogenic H5N1 avian influenza virus is dependent on the virus lineage
JS Long, WA Howard, A Núñez, O Moncorgé, S Lycett, J Banks, ...
Journal of virology 87 (18), 9983-9996, 2013
492013
Phylogenetic tools for generalized HIV-1 epidemics: findings from the PANGEA-HIV methods comparison
O Ratmann, EB Hodcroft, M Pickles, A Cori, M Hall, S Lycett, C Colijn, ...
Molecular biology and evolution 34 (1), 185-203, 2017
382017
Use of bacterial whole-genome sequencing to investigate local persistence and spread in bovine tuberculosis
H Trewby, D Wright, EL Breadon, SJ Lycett, TR Mallon, C McCormick, ...
Epidemics 14, 26-35, 2016
382016
The evolutionary dynamics of influenza A virus adaptation to mammalian hosts
S Bhatt, TT Lam, SJ Lycett, AJ Leigh Brown, TA Bowden, EC Holmes, ...
Philosophical Transactions of the Royal Society B: Biological Sciences 368 …, 2013
362013
Investigation of influenza virus polymerase activity in pig cells
O Moncorgé, JS Long, AV Cauldwell, H Zhou, SJ Lycett, WS Barclay
Journal of virology 87 (1), 384-394, 2013
352013
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