Filipe G. Vieira
Filipe G. Vieira
Natural History Museum, University of Copenhagen
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Evolution of genes and genomes on the Drosophila phylogeny
AG Clark, MB Eisen, DR Smith, CM Bergman, B Oliver, TA Markow, ...
Nature 450 (7167), 203-218, 2007
Genome sequence of the pea aphid Acyrthosiphon pisum
International Aphid Genomics Consortium
PLoS biology 8 (2), e1000313, 2010
Genome sequences of the human body louse and its primary endosymbiont provide insights into the permanent parasitic lifestyle
EF Kirkness, BJ Haas, W Sun, HR Braig, MA Perotti, JM Clark, SH Lee, ...
Proceedings of the National Academy of Sciences 107 (27), 12168-12173, 2010
Genomic insights into the Ixodes scapularis tick vector of Lyme disease
M Gulia-Nuss, AB Nuss, JM Meyer, DE Sonenshine, RM Roe, ...
Nature communications 7 (1), 10507, 2016
Molecular evolution of the major chemosensory gene families in insects
A Sanchez-Gracia, FG Vieira, J Rozas
Heredity 103 (3), 208-216, 2009
Comparative genomics of the odorant-binding and chemosensory protein gene families across the Arthropoda: origin and evolutionary history of the chemosensory system
FG Vieira, J Rozas
Genome biology and evolution 3, 476-490, 2011
Genome-culture coevolution promotes rapid divergence of killer whale ecotypes
AD Foote, N Vijay, MC Ávila-Arcos, RW Baird, JW Durban, M Fumagalli, ...
Nature Communications 7, 2016
ngsTools: methods for population genetics analyses from next-generation sequencing data
M Fumagalli, FG Vieira, T Linderoth, R Nielsen
Bioinformatics 30 (10), 1486-1487, 2014
Quantifying population genetic differentiation from Next-Generation sequencing data
M Fumagalli, FG Vieira, TS Korneliussen, T Linderoth, E Huerta-Sánchez, ...
Genetics 195 (3), 979-992, 2013
Evolutionary Genomics and Conservation of the Endangered Przewalski’s Horse
C Der Sarkissian, L Ermini, M Schubert, MA Yang, P Librado, M Fumagalli, ...
Current Biology 25 (19), 2577-2583, 2015
Comparative genomic analysis of the odorant-binding protein family in 12 Drosophila genomes: purifying selection and birth-and-death evolution
FG Vieira, A Sánchez-Gracia, J Rozas
Genome Biol 8 (11), R235, 2007
Genome annotation and comparative analyses of the odorant‐binding proteins and chemosensory proteins in the pea aphid Acyrthosiphon pisum
JJ Zhou, FG Vieira, XL He, C Smadja, R Liu, J Rozas, LM Field
Insect molecular biology 19, 113-122, 2010
The origin and evolution of maize in the Southwestern United States
RR da Fonseca, BD Smith, N Wales, E Cappellini, P Skoglund, ...
Nature plants 1, 14003, 2015
Comparative performance of the BGISEQ-500 vs Illumina HiSeq2500 sequencing platforms for palaeogenomic sequencing
SST Mak, S Gopalakrishnan, C Carøe, C Geng, S Liu, MHS Sinding, ...
GigaScience 6 (8), 1-13, 2017
Parallel adaptation of rabbit populations to myxoma virus
JM Alves, M Carneiro, JY Cheng, A Lemos de Matos, MM Rahman, ...
Science 363 (6433), 1319-1326, 2019
Interspecific gene flow shaped the evolution of the genus Canis
S Gopalakrishnan, MHS Sinding, J Ramos-Madrigal, J Niemann, ...
Current Biology 28 (21), 3441-3449. e5, 2018
BadiRate: estimating family turnover rates by likelihood-based methods
P Librado, FG Vieira, J Rozas
Bioinformatics 28 (2), 279-281, 2012
Improving the estimation of genetic distances from Next-Generation Sequencing data
FG Vieira, F Lassalle, TS Korneliussen, M Fumagalli
Biological journal of the Linnean Society 117 (1), 139-149, 2016
Asian wild rice is a hybrid swarm with extensive gene flow and feralization from domesticated rice
H Wang, FG Vieira, JE Crawford, C Chu, R Nielsen
Genome Research, gr. 204800.116, 2017
The power of inbreeding: NGS-based GWAS of rice reveals convergent evolution during rice domestication
H Wang, X Xu, FG Vieira, Y Xiao, Z Li, J Wang, R Nielsen, C Chu
Molecular plant 9 (7), 975-985, 2016
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