Inna Dubchak
Title
Cited by
Cited by
Year
Initial sequencing and comparative analysis of the mouse genome
RH Waterston, L Pachter
Nature 420 (6915), 520-562, 2002
73472002
The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)
GA Tuskan, S Difazio, S Jansson, J Bohlmann, I Grigoriev, U Hellsten, ...
science 313 (5793), 1596-1604, 2006
42332006
The Sorghum bicolor genome and the diversification of grasses
AH Paterson, JE Bowers, R Bruggmann, I Dubchak, J Grimwood, ...
Nature 457 (7229), 551-556, 2009
28572009
The Chlamydomonas genome reveals the evolution of key animal and plant functions
SS Merchant, SE Prochnik, O Vallon, EH Harris, SJ Karpowicz, ...
Science 318 (5848), 245-250, 2007
25202007
Genome sequence of the Brown Norway rat yields insights into mammalian evolution
RA Gibbs, L Pachter
Nature 428 (6982), 493-521, 2004
22642004
VISTA: computational tools for comparative genomics
KA Frazer, L Pachter, A Poliakov, EM Rubin, I Dubchak
Nucleic acids research 32 (suppl_2), W273-W279, 2004
16992004
The amphioxus genome and the evolution of the chordate karyotype
NH Putnam, T Butts, DEK Ferrier, RF Furlong, U Hellsten, T Kawashima, ...
Nature 453 (7198), 1064-1071, 2008
15432008
In vivo enhancer analysis of human conserved non-coding sequences
LA Pennacchio, N Ahituv, AM Moses, S Prabhakar, MA Nobrega, ...
Nature 444 (7118), 499-502, 2006
11922006
Multi-class protein fold recognition using support vector machines and neural networks
CHQ Ding, I Dubchak
Bioinformatics 17 (4), 349-358, 2001
11022001
Phytophthora genome sequences uncover evolutionary origins and mechanisms of pathogenesis
BM Tyler, S Tripathy, X Zhang, P Dehal, RHY Jiang, A Aerts, ...
Science 313 (5791), 1261-1266, 2006
10892006
VISTA: visualizing global DNA sequence alignments of arbitrary length
C Mayor, M Brudno, JR Schwartz, A Poliakov, EM Rubin, KA Frazer, ...
Bioinformatics 16 (11), 1046-1047, 2000
10112000
VISTA Enhancer Browser—a database of tissue-specific human enhancers
A Visel, S Minovitsky, I Dubchak, LA Pennacchio
Nucleic acids research 35 (suppl_1), D88-D92, 2007
9252007
MycoCosm portal: gearing up for 1000 fungal genomes
IV Grigoriev, R Nikitin, S Haridas, A Kuo, R Ohm, R Otillar, R Riley, ...
Nucleic acids research 42 (D1), D699-D704, 2014
8522014
The genome of the Western clawed frog Xenopus tropicalis
U Hellsten, RM Harland, MJ Gilchrist, D Hendrix, J Jurka, V Kapitonov, ...
Science 328 (5978), 633-636, 2010
7562010
The genome of Eucalyptus grandis
AA Myburg, D Grattapaglia, GA Tuskan, U Hellsten, RD Hayes, ...
Nature 510 (7505), 356-362, 2014
6372014
The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation
B Palenik, J Grimwood, A Aerts, P Rouzé, A Salamov, N Putnam, ...
Proceedings of the National Academy of Sciences 104 (18), 7705-7710, 2007
6242007
Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas
AZ Worden, JH Lee, T Mock, P Rouzé, MP Simmons, AL Aerts, AE Allen, ...
Science 324 (5924), 268-272, 2009
6202009
AVID: A global alignment program
N Bray, I Dubchak, L Pachter
Genome research 13 (1), 97-102, 2003
6132003
Comparative genome sequencing of Drosophila pseudoobscura: chromosomal, gene, and cis-element evolution
S Richards, Y Liu, BR Bettencourt, P Hradecky, S Letovsky, R Nielsen, ...
Genome research 15 (1), 1-18, 2005
5712005
Genomic variation in 3,010 diverse accessions of Asian cultivated rice
W Wang, R Mauleon, Z Hu, D Chebotarov, S Tai, Z Wu, M Li, T Zheng, ...
Nature 557 (7703), 43-49, 2018
5622018
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Articles 1–20