|SALMON: survival analysis learning with multi-omics neural networks on breast cancer|
Z Huang, X Zhan, S Xiang, TS Johnson, B Helm, CY Yu, J Zhang, ...
Frontiers in genetics 10, 166, 2019
|BERMUDA: a novel deep transfer learning method for single-cell RNA sequencing batch correction reveals hidden high-resolution cellular subtypes|
T Wang, TS Johnson, W Shao, Z Lu, BR Helm, J Zhang, K Huang
Genome biology 20 (1), 1-15, 2019
|Metamorphosis is induced by food absence rather than a critical weight in the solitary bee, Osmia lignaria|
BR Helm, JP Rinehart, GD Yocum, KJ Greenlee, JH Bowsher
Proceedings of the National Academy of Sciences 114 (41), 10924-10929, 2017
|Deep learning-based cancer survival prognosis from RNA-seq data: approaches and evaluations|
Z Huang, TS Johnson, Z Han, B Helm, S Cao, C Zhang, P Salama, ...
BMC medical genomics 13 (5), 1-12, 2020
|Percent lipid is associated with body size but not task in the bumble bee Bombus impatiens|
MJ Couvillon, JM Jandt, J Bonds, BR Helm, A Dornhaus
Journal of Comparative Physiology A 197 (11), 1097-1104, 2011
|Mass and volume growth of an insect tracheal system within a single instar|
BR Helm, G Davidowitz
Journal of Experimental Biology 216 (24), 4703-4711, 2013
|Correlation analysis of histopathology and proteogenomics data for breast cancer|
X Zhan, J Cheng, Z Huang, Z Han, B Helm, X Liu, J Zhang, TF Wang, D Ni, ...
Molecular & Cellular Proteomics 18 (8), S37-S51, 2019
|The geometric framework for nutrition reveals interactions between protein and carbohydrate during larval growth in honey bees|
BR Helm, GP Slater, A Rajamohan, GD Yocum, KJ Greenlee, JH Bowsher
Biology open 6 (6), 872-880, 2017
|Extended hypoxia in the alfalfa leafcutting bee, Megachile rotundata, increases survival but causes sub-lethal effects|
H Abdelrahman, JP Rinehart, GD Yocum, KJ Greenlee, BR Helm, ...
Journal of insect physiology 64, 81-89, 2014
|Micro-computed tomography of pupal metamorphosis in the solitary bee Megachile rotundata|
BR Helm, S Payne, JP Rinehart, GD Yocum, JH Bowsher, KJ Greenlee
Arthropod structure & development 47 (5), 521-528, 2018
|Predicting performance and plasticity in the development of respiratory structures and metabolic systems|
KJ Greenlee, KL Montooth, BR Helm
Integrative and Comparative Biology 54 (2), 307-322, 2014
|A common framework for the regulation of growth and size: stepping away from the trees to see the forest|
G Davidowitz, BR Helm
Integrative Organismal Biology, 207-217, 2014
|Spatial cell type composition in normal and Alzheimers human brains is revealed using integrated mouse and human single cell RNA sequencing|
TS Johnson, S Xiang, BR Helm, ZB Abrams, P Neidecker, R Machiraju, ...
Scientific reports 10 (1), 1-14, 2020
|Phenotypic integration in an extended phenotype: among‐individual variation in nest‐building traits of the alfalfa leafcutting bee (Megachile rotundata)|
R Royauté, ES Wilson, BR Helm, RE Mallinger, J Prasifka, KJ Greenlee, ...
Journal of evolutionary biology 31 (7), 944-956, 2018
|Comparison of the chemical compositions of the cuticle and dufour’s gland of two solitary bee species from laboratory and field conditions|
TL Pitts-Singer, MM Hagen, BR Helm, S Highland, JS Buckner, WP Kemp
Journal of chemical ecology 43 (5), 451-468, 2017
|Gene co-expression networks restructured gene fusion in rhabdomyosarcoma cancers|
BR Helm, X Zhan, PH Pandya, ME Murray, KE Pollok, JL Renbarger, ...
Genes 10 (9), 665, 2019
|Evidence of a hemolymph-born factor that induces onset of maturation in Manduca sexta larvae|
BR Helm, G Davidowitz
Journal of insect physiology 78, 78-86, 2015
|Body and Wing Allometries Reveal Flight-Fecundity Tradeoff in Response to Larval Provisioning in Osmia lignaria (Hymenoptera: Megachilidae)|
BR Helm, MA Baldwin, JP Rinehart, GD Yocum, KJ Greenlee, ...
Journal of Insect Science 21 (3), 11, 2021
|Integration of Mouse and Human Single-cell RNA Sequencing Infers Spatial Cell-type Composition in Human Brains|
TS Johnson, ZB Abrams, BR Helm, P Neidecker, R Machiraju, Y Zhang, ...
bioRxiv, 527499, 2019
|Nutrient effects on energy allocation among body parts within an individual|
G Davidowitz, AD Daws, AF Moore, BR Helm, RC Stillwell
Integrative and Comparative Biology 54, E48-E48, 2014