| The histone deacetylase inhibitor valproic acid selectively induces proteasomal degradation of HDAC2 OH Krämer, P Zhu, HP Ostendorff, M Golebiewski, J Tiefenbach, ... The EMBO journal 22 (13), 3411-3420, 2003 | 606 | 2003 |
| Controlled vocabularies and semantics in systems biology M Courtot, N Juty, C Knüpfer, D Waltemath, A Zhukova, A Dräger, ... Molecular systems biology 7 (1), 543, 2011 | 298 | 2011 |
| SABIO-RK—database for biochemical reaction kinetics U Wittig, R Kania, M Golebiewski, M Rey, L Shi, L Jong, E Algaa, ... Nucleic acids research 40 (D1), D790-D796, 2012 | 278 | 2012 |
| Path2Models: large-scale generation of computational models from biochemical pathway maps F Büchel, N Rodriguez, N Swainston, C Wrzodek, T Czauderna, R Keller, ... BMC systems biology 7, 1-19, 2013 | 160 | 2013 |
| COMBINE archive and OMEX format: one file to share all information to reproduce a modeling project FT Bergmann, R Adams, S Moodie, J Cooper, M Glont, M Golebiewski, ... BMC bioinformatics 15 (1), 1-9, 2014 | 125 | 2014 |
| SBML Level 3: an extensible format for the exchange and reuse of biological models SM Keating, D Waltemath, M König, F Zhang, A Dräger, C Chaouiya, ... Molecular systems biology 16 (8), e9110, 2020 | 124 | 2020 |
| SEEK: a systems biology data and model management platform K Wolstencroft, S Owen, O Krebs, Q Nguyen, NJ Stanford, M Golebiewski, ... BMC systems biology 9 (1), 1-12, 2015 | 105 | 2015 |
| FAIRDOMHub: a repository and collaboration environment for sharing systems biology research K Wolstencroft, O Krebs, JL Snoep, NJ Stanford, F Bacall, M Golebiewski, ... Nucleic acids research 45 (D1), D404-D407, 2017 | 98 | 2017 |
| SABIO-RK: integration and curation of reaction kinetics data U Wittig, M Golebiewski, R Kania, O Krebs, S Mir, A Weidemann, ... Data Integration in the Life Sciences: Third International Workshop, DILS …, 2006 | 79 | 2006 |
| Promoting coordinated development of community-based information standards for modeling in biology: the COMBINE initiative M Hucka, DP Nickerson, GD Bader, FT Bergmann, J Cooper, E Demir, ... Frontiers in bioengineering and biotechnology 3, 19, 2015 | 73 | 2015 |
| Storing and annotating of kinetic data I Rojas, M Golebiewski, R Kania, O Krebs, S Mir, A Weidemann, U Wittig In silico biology 7 (2 Supplement), 37-44, 2007 | 50 | 2007 |
| Harmonizing semantic annotations for computational models in biology ML Neal, M König, D Nickerson, G Mısırlı, R Kalbasi, A Dräger, K Atalag, ... Briefings in bioinformatics 20 (2), 540-550, 2019 | 48 | 2019 |
| COVID19 Disease Map, a computational knowledge repository of virus–host interaction mechanisms M Ostaszewski, A Niarakis, A Mazein, I Kuperstein, R Phair, ... Molecular systems biology 17 (10), e10387, 2021 | 45 | 2021 |
| The evolution of standards and data management practices in systems biology NJ Stanford, K Wolstencroft, M Golebiewski, R Kania, N Juty, C Tomlinson, ... Molecular systems biology 11 (12), 851, 2015 | 40 | 2015 |
| SBML2LaTEX: Conversion of SBML files into human-readable reports A Dräger, H Planatscher, D Motsou Wouamba, A Schröder, M Hucka, ... Bioinformatics 25 (11), 1455-1456, 2009 | 32 | 2009 |
| Specifications of standards in systems and synthetic biology: status and developments in 2020 F Schreiber, B Sommer, T Czauderna, M Golebiewski, TE Gorochowski, ... Journal of integrative bioinformatics 17 (2-3), 2020 | 31 | 2020 |
| Enzyme kinetics informatics: from instrument to browser N Swainston, M Golebiewski, HL Messiha, N Malys, R Kania, S Kengne, ... The FEBS Journal 277 (18), 3769-3779, 2010 | 31 | 2010 |
| Meeting report from the fourth meeting of the Computational Modeling in Biology Network (COMBINE) D Waltemath, FT Bergmann, C Chaouiya, T Czauderna, P Gleeson, ... Standards in genomic sciences 9 (3), 1285-1301, 2014 | 29 | 2014 |
| The Human Physiome: how standards, software and innovative service infrastructures are providing the building blocks to make it achievable D Nickerson, K Atalag, B De Bono, J Geiger, C Goble, S Hollmann, ... Interface Focus 6 (2), 20150103, 2016 | 28 | 2016 |
| SABIO-RK: a database for biochemical reactions and their kinetics I Rojas, M Golebiewski, R Kania, O Krebs, S Mir, A Weidemann, U Wittig BMC Systems Biology 1 (1), 1-2, 2007 | 28 | 2007 |
