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Ivan V. Antonov
Ivan V. Antonov
Research Centre of Biotechnology RAS, Moscow, Russia
Geverifieerd e-mailadres voor gatech.edu - Homepage
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Functional annotation of human long noncoding RNAs via molecular phenotyping
JA Ramilowski, CW Yip, S Agrawal, JC Chang, Y Ciani, IV Kulakovskiy, ...
Genome research 30 (7), 1060-1072, 2020
1322020
A pilot study of bacterial genes with disrupted ORFs reveals a surprising profusion of protein sequence recoding mediated by ribosomal frameshifting and transcriptional realignment
V Sharma, AE Firth, I Antonov, O Fayet, JF Atkins, M Borodovsky, ...
Molecular biology and evolution 28 (11), 3195-3211, 2011
582011
Gene discovery in EST sequences from the wheat leaf rust fungus Puccinia triticina sexual spores, asexual spores and haustoria, compared to other rust and corn …
J Xu, R Linning, J Fellers, M Dickinson, W Zhu, I Antonov, DL Joly, ...
BMC genomics 12, 1-15, 2011
562011
Prediction of lncRNAs and their interactions with nucleic acids: benchmarking bioinformatics tools
IV Antonov, E Mazurov, M Borodovsky, YA Medvedeva
Briefings in bioinformatics 20 (2), 551-564, 2019
542019
Genetack: frameshift identification in protein-coding sequences by the Viterbi algorithm
I Antonov, M Borodovsky
Journal of bioinformatics and computational biology 8 (03), 535-551, 2010
482010
Identification of the nature of reading frame transitions observed in prokaryotic genomes
I Antonov, A Coakley, JF Atkins, PV Baranov, M Borodovsky
Nucleic acids research 41 (13), 6514-6530, 2013
462013
Genome sequences for five strains of the emerging pathogen Haemophilus haemolyticus
IK Jordan, AB Conley, IV Antonov, RA Arthur, ED Cook, GP Cooper, ...
Journal of bacteriology 193 (20), 5879-5880, 2011
282011
Practical guidance in genome-wide RNA: DNA triple helix prediction
E Matveishina, I Antonov, YA Medvedeva
International journal of molecular sciences 21 (3), 830, 2020
192020
MetaGeneTack: ab initio detection of frameshifts in metagenomic sequences
S Tang, I Antonov, M Borodovsky
Bioinformatics 29 (1), 114-116, 2013
192013
GeneTack database: genes with frameshifts in prokaryotic genomes and eukaryotic mRNA sequences
I Antonov, P Baranov, M Borodovsky
Nucleic acids research 41 (D1), D152-D156, 2012
192012
ASSA: Fast identification of statistically significant interactions between long RNAs
I Antonov, A Marakhonov, M Zamkova, Y Medvedeva
Journal of bioinformatics and computational biology 16 (01), 1840001, 2018
132018
Purine-rich low complexity regions are potential RNA binding hubs in the human genome
I Antonov, YA Medvedeva
F1000Research 7, 2018
102018
Direct interactions with nascent transcripts is potentially a common targeting mechanism of long non-coding RNAs
I Antonov, Y Medvedeva
Genes 11 (12), 1483, 2020
82020
Two Cobalt Chelatase Subunits Can Be Generated from a Single chlD Gene via Programed Frameshifting
IV Antonov
Molecular Biology and Evolution 37 (8), 2268-2278, 2020
82020
Analysis of discordant Affymetrix probesets casts serious doubt on idea of microarray data reutilization
A Marakhonov, N Sadovskaya, I Antonov, A Baranova, M Skoblov
Bmc Genomics 15, 1-15, 2014
42014
Translational Frameshifting in the chlD Gene Gives a Clue to the Coevolution of the Chlorophyll and Cobalamin Biosyntheses
S Kuznetsov, A Milenkin, I Antonov
Microorganisms 10 (6), 1200, 2022
12022
Streptomyces rare codon UUA: from features associated with 2 adpA related locations to candidate phage regulatory translational bypassing
IV Antonov, S O’Loughlin, AN Gorohovski, PBF O’Connor, PV Baranov, ...
RNA biology 20 (1), 926-942, 2023
2023
Functional annotation of lncRNAs involved in epigenetic regulation
E Mazurov, I Antonov, A Zubritskiy, A Budkina, E Matveishina, VJ Makeev, ...
Bioinformatics of Genome Regulation and Structure/Systems Biology (BGRS/SB …, 2022
2022
Search for frame shift signals in bacterial genomes
A Petrov, A Milenkin, I Antonov
2021
Triplex target sites of MEG3 RNA-chromatin interactions
YA Medvedeva, I Antonov
F1000Research 7, 2018
2018
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Artikelen 1–20