| Gene prioritization through genomic data fusion S Aerts, D Lambrechts, S Maity, P Van Loo, B Coessens, F De Smet, ... Nature biotechnology 24 (5), 537-544, 2006 | 1028 | 2006 |
| SCENIC: single-cell regulatory network inference and clustering S Aibar, CB González-Blas, T Moerman, VA Huynh-Thu, H Imrichova, ... Nature methods 14 (11), 1083-1086, 2017 | 971 | 2017 |
| Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures A Stark, MF Lin, P Kheradpour, JS Pedersen, L Parts, JW Carlson, ... Nature 450 (7167), 219-232, 2007 | 676 | 2007 |
| Phenotype molding of stromal cells in the lung tumor microenvironment D Lambrechts, E Wauters, B Boeckx, S Aibar, D Nittner, O Burton, ... Nature medicine 24 (8), 1277-1289, 2018 | 550 | 2018 |
| iRegulon: from a gene list to a gene regulatory network using large motif and track collections R Janky, A Verfaillie, H Imrichova, B Van de Sande, L Standaert, ... PLoS computational biology 10 (7), e1003731, 2014 | 523 | 2014 |
| Alteration of the micro RNA network during the progression of Alzheimer's disease P Lau, K Bossers, R Janky, E Salta, CS Frigerio, S Barbash, R Rothman, ... EMBO molecular medicine 5 (10), 1613-1634, 2013 | 373 | 2013 |
| Exome sequencing identifies mutation in CNOT3 and ribosomal genes RPL5 and RPL10 in T-cell acute lymphoblastic leukemia K De Keersmaecker, ZK Atak, N Li, C Vicente, S Patchett, T Girardi, ... Nature Genetics, 2012 | 372 | 2012 |
| Melanoma addiction to the long non-coding RNA SAMMSON E Leucci, R Vendramin, M Spinazzi, P Laurette, M Fiers, J Wouters, ... Nature 531 (7595), 518-522, 2016 | 359 | 2016 |
| A single-cell transcriptome atlas of the aging Drosophila brain K Davie, J Janssens, D Koldere, M De Waegeneer, U Pech, Ł Kreft, ... Cell 174 (4), 982-998. e20, 2018 | 318 | 2018 |
| ORegAnno: an open-access community-driven resource for regulatory annotation OL Griffith, SB Montgomery, B Bernier, B Chu, K Kasaian, S Aerts, ... Nucleic acids research 36 (suppl_1), D107-D113, 2007 | 302 | 2007 |
| p53 induces formation of NEAT1 lncRNA-containing paraspeckles that modulate replication stress response and chemosensitivity C Adriaens, L Standaert, J Barra, M Latil, A Verfaillie, P Kalev, B Boeckx, ... Nature medicine 22 (8), 861-868, 2016 | 285 | 2016 |
| Decoding the regulatory landscape of melanoma reveals TEADS as regulators of the invasive cell state A Verfaillie, H Imrichova, ZK Atak, M Dewaele, F Rambow, G Hulselmans, ... Nature communications 6 (1), 1-16, 2015 | 269 | 2015 |
| E ndeavour update: a web resource for gene prioritization in multiple species LC Tranchevent, R Barriot, S Yu, S Van Vooren, P Van Loo, B Coessens, ... Nucleic acids research 36 (suppl_2), W377-W384, 2008 | 266 | 2008 |
| Toward minimal residual disease-directed therapy in melanoma F Rambow, A Rogiers, O Marin-Bejar, S Aibar, J Femel, M Dewaele, ... Cell 174 (4), 843-855. e19, 2018 | 261 | 2018 |
| Toucan: deciphering the cis ‐regulatory logic of coregulated genes S Aerts, G Thijs, B Coessens, M Staes, Y Moreau, BD Moor Nucleic acids research 31 (6), 1753-1764, 2003 | 236 | 2003 |
| Comparison and meta-analysis of microarray data: from the bench to the computer desk Y Moreau, S Aerts, B De Moor, B De Strooper, M Dabrowski TRENDS in Genetics 19 (10), 570-577, 2003 | 213 | 2003 |
| TOUCAN 2: the all-inclusive open source workbench for regulatory sequence analysis S Aerts, P Van Loo, G Thijs, H Mayer, R De Martin, Y Moreau, B De Moor Nucleic acids research 33 (suppl_2), W393-W396, 2005 | 182 | 2005 |
| Computational detection of cis -regulatory modules S Aerts, P Van Loo, G Thijs, Y Moreau, B De Moor Bioinformatics 19 (suppl_2), ii5-ii14, 2003 | 168 | 2003 |
| Discovery of Transcription Factors and Regulatory Regions Driving In Vivo Tumor Development by ATAC-seq and FAIRE-seq Open Chromatin Profiling K Davie, J Jacobs, M Atkins, D Potier, V Christiaens, G Halder, S Aerts PLoS genetics 11 (2), e1004994, 2015 | 146 | 2015 |
| Comprehensive analysis of transcriptome variation uncovers known and novel driver events in T-cell acute lymphoblastic leukemia Z Kalender Atak, V Gianfelici, G Hulselmans, K De Keersmaecker, ... PLoS genetics 9 (12), e1003997, 2013 | 144 | 2013 |
Zeynep Kalender AtakResearch Associate at CRUK Cambridge Institute, University of CambridgeVerified email at cruk.cam.ac.uk
