Guang Lan Zhang
Guang Lan Zhang
CS Department, MET, Boston University; Dana-Farber Cancer Institute, Harvard Medical School
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Evaluation of MHC-II peptide binding prediction servers: applications for vaccine research
V Lin,HH, Zhang,GL, Tongchusak,S, Reinherz,EL, Brusic
BMC Bioinformatics 9 (Suppl 12), S22, 2008
Mass spectrometry profiling of HLA-associated peptidomes in mono-allelic cells enables more accurate epitope prediction
JG Abelin, DB Keskin, S Sarkizova, CR Hartigan, W Zhang, J Sidney, ...
Immunity 46 (2), 315-326, 2017
Reverse transcriptase template switching and false alternative transcripts
J Cocquet, A Chong, G Zhang, RA Veitia
Genomics 88 (1), 127-131, 2006
Evolutionarily conserved protein sequences of influenza a viruses, avian and human, as vaccine targets
AT Heiny, O Miotto, KN Srinivasan, AM Khan, GL Zhang, V Brusic, TW Tan, ...
PloS one 2 (11), e1190, 2007
MULTIPRED: a computational system for prediction of promiscuous HLA binding peptides
GL Zhang, AM Khan, KN Srinivasan, JT August, V Brusic
Nucleic acids research 33 (suppl_2), W172-W179, 2005
Dragon Promoter Finder: recognition of vertebrate RNA polymerase II promoters
VB Bajic, SH Seah, A Chong, G Zhang, JLY Koh, V Brusic
Bioinformatics 18 (1), 198-199, 2002
Prediction of promiscuous peptides that bind HLA class I molecules
V Brusic, N Petrovsky, G Zhang, VB Bajic
Immunology and Cell Biology 80 (3), 280-285, 2002
Conservation and variability of dengue virus proteins: implications for vaccine design
AM Khan, O Miotto, EJM Nascimento, KN Srinivasan, AT Heiny, GL Zhang, ...
PLoS Negl Trop Dis 2 (8), e272, 2008
PRED TAP: a system for prediction of peptide binding to the human transporter associated with antigen processing
GL Zhang, N Petrovsky, CK Kwoh, JT August, V Brusic
Immunome research 2 (1), 1-12, 2006
A conserved E7-derived cytotoxic T lymphocyte epitope expressed on human papillomavirus 16-transformed HLA-A2+ epithelial cancers
AB Riemer, DB Keskin, G Zhang, M Handley, KS Anderson, V Brusic, ...
Journal of Biological Chemistry 285 (38), 29608-29622, 2010
A large peptidome dataset improves HLA class I epitope prediction across most of the human population
S Sarkizova, S Klaeger, PM Le, LW Li, G Oliveira, H Keshishian, ...
Nature biotechnology 38 (2), 199-209, 2020
Mutated BCR-ABL generates immunogenic T-cell epitopes in CML patients
A Cai, DB Keskin, DS DeLuca, A Alonso, W Zhang, GL Zhang, ...
Clinical Cancer Research 18 (20), 5761-5772, 2012
PRED BALB/c : a system for the prediction of peptide binding to H2 d molecules, a haplotype of the BALB/c mouse
GL Zhang, KN Srinivasan, A Veeramani, JT August, V Brusic
Nucleic acids research 33 (suppl_2), W180-W183, 2005
Machine learning competition in immunology–Prediction of HLA class I binding peptides
GL Zhang, HR Ansari, P Bradley, GC Cawley, T Hertz, X Hu, N Jojic, ...
Journal of immunological methods 374 (1-2), 1-4, 2011
MULTIPRED2: a computational system for large-scale identification of peptides predicted to bind to HLA supertypes and alleles
GL Zhang, DS DeLuca, DB Keskin, L Chitkushev, T Zlateva, O Lund, ...
Journal of immunological methods 374 (1-2), 53-61, 2011
Prediction of HLA-DQ3. 2β ligands: Evidence of multiple registers in class II binding peptides
JC Tong, GL Zhang, TW Tan, JT August, V Brusic, S Ranganathan
Bioinformatics 22 (10), 1232-1238, 2006
Transcriptionally abundant major histocompatibility complex class I alleles are fundamental to nonhuman primate simian immunodeficiency virus-specific CD8+ T cell responses
ML Budde, JJ Lhost, BJ Burwitz, EA Becker, CM Burns, SL O'Connor, ...
Journal of virology 85 (7), 3250-3261, 2011
Prediction of supertype-specific HLA class I binding peptides using support vector machines
GL Zhang, I Bozic, CK Kwoh, JT August, V Brusic
Journal of immunological methods 320 (1-2), 143-154, 2007
BCL2-specific inhibitor ABT-199 synergizes strongly with cytarabine against the early immature LOUCY cell line but not more-differentiated T-ALL cell lines
NM Anderson, I Harrold, MR Mansour, T Sanda, M McKeown, N Nagykary, ...
Leukemia 28 (5), 1145-1148, 2014
Prediction of class I T-cell epitopes: evidence of presence of immunological hot spots inside antigens
KN Srinivasan, GL Zhang, AM Khan, JT August, V Brusic
Bioinformatics 20 (suppl_1), i297-i302, 2004
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