Haiyan Huang, Professor
Cited by
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An integrated encyclopedia of DNA elements in the human genome
ENCODE Project Consortium
Nature 489 (7414), 57-74, 2012
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
ENCODE Project Consortium
nature 447 (7146), 799, 2007
Molecular characterization of the tumor microenvironment in breast cancer
M Allinen, R Beroukhim, L Cai, C Brennan, J Lahti-Domenici, H Huang, ...
Cancer cell 6 (1), 17-32, 2004
A draft sequence for the genome of the domesticated silkworm (Bombyx mori)
Q Xia, Z Zhou, C Lu, D Cheng, F Dai, B Li, P Zhao, X Zha, T Cheng, ...
Science 306 (5703), 1937-1940, 2004
Genomic analysis of mouse retinal development
S Blackshaw, S Harpavat, J Trimarchi, L Cai, H Huang, WP Kuo, G Weber, ...
PLoS biology 2 (9), 2004
Measuring reproducibility of high-throughput experiments
Q Li, JB Brown, H Huang, PJ Bickel
The annals of applied statistics 5 (3), 1752-1779, 2011
Comparative analysis of the transcriptome across distant species
MB Gerstein, J Rozowsky, KK Yan, D Wang, C Cheng, JB Brown, ...
Nature 512 (7515), 445-448, 2014
Temporal dissection of tumorigenesis in primary cancers
S Durinck, C Ho, NJ Wang, W Liao, LR Jakkula, EA Collisson, J Pons, ...
Cancer discovery 1 (2), 137-143, 2011
Functional annotation and network reconstruction through cross-platform integration of microarray data
XJ Zhou, MCJ Kao, H Huang, A Wong, J Nunez-Iglesias, M Primig, ...
Nature biotechnology 23 (2), 238-243, 2005
Comparative analysis of regulatory information and circuits across distant species
AP Boyle, CL Araya, C Brdlik, P Cayting, C Cheng, Y Cheng, K Gardner, ...
Nature 512 (7515), 453-456, 2014
Sparse linear modeling of next-generation mRNA sequencing (RNA-Seq) data for isoform discovery and abundance estimation
JJ Li, CR Jiang, JB Brown, H Huang, PJ Bickel
Proceedings of the National Academy of Sciences 108 (50), 19867-19872, 2011
Review on statistical methods for gene network reconstruction using expression data
YXR Wang, H Huang
Journal of theoretical biology 362, 53-61, 2014
Finding short DNA motifs using permuted Markov models
X Zhao, H Huang, TP Speed
Journal of Computational Biology 12 (6), 894-906, 2005
Clustering analysis of SAGE data using a Poisson approach
L Cai, H Huang, S Blackshaw, JS Liu, C Cepko, WH Wong
Genome biology 5 (7), R51, 2004
Profiling protein expression in circulating tumour cells using microfluidic western blotting
E Sinkala, E Sollier-Christen, C Renier, E Rosas-Canyelles, J Che, ...
Nature communications 8 (1), 1-12, 2017
Distributional regimes for the number of k-word matches between two random sequences
RA Lippert, H Huang, MS Waterman
Proceedings of the National Academy of Sciences 99 (22), 13980-13989, 2002
Systematic discovery of functional modules and context-specific functional annotation of human genome
Y Huang, H Li, H Hu, X Yan, MS Waterman, H Huang, XJ Zhou
Bioinformatics 23 (13), i222-i229, 2007
Comparison of D. melanogaster and C. elegans developmental stages, tissues, and cells by modENCODE RNA-seq data
JJ Li, H Huang, PJ Bickel, SE Brenner
Genome research 24 (7), 1086-1101, 2014
Subsampling methods for genomic inference
PJ Bickel, N Boley, JB Brown, H Huang, NR Zhang
The Annals of Applied Statistics 4 (4), 1660-1697, 2010
Transcription profile analyses identify genes and pathways central to root cap functions in maize
K Jiang, S Zhang, S Lee, G Tsai, K Kim, H Huang, C Chilcott, T Zhu, ...
Plant molecular biology 60 (3), 343-363, 2006
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