| Global identification of microRNA–target RNA pairs by parallel analysis of RNA ends MA German, M Pillay, DH Jeong, A Hetawal, S Luo, P Janardhanan, ... Nature biotechnology 26 (8), 941-946, 2008 | 918 | 2008 |
| IMG/M v. 5.0: an integrated data management and comparative analysis system for microbial genomes and microbiomes IMA Chen, K Chu, K Palaniappan, M Pillay, A Ratner, J Huang, ... Nucleic acids research 47 (D1), D666-D677, 2019 | 801 | 2019 |
| IMG 4 version of the integrated microbial genomes comparative analysis system VM Markowitz, IMA Chen, K Palaniappan, K Chu, E Szeto, M Pillay, ... Nucleic acids research 42 (D1), D560-D567, 2014 | 592 | 2014 |
| IMG/M: integrated genome and metagenome comparative data analysis system IMA Chen, VM Markowitz, K Chu, K Palaniappan, E Szeto, M Pillay, ... Nucleic acids research, gkw929, 2016 | 470 | 2016 |
| The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v. 4) M Huntemann, NN Ivanova, K Mavromatis, HJ Tripp, D Paez-Espino, ... Standards in genomic sciences 10, 1-6, 2015 | 406 | 2015 |
| The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v. 4) M Huntemann, NN Ivanova, K Mavromatis, HJ Tripp, D Paez-Espino, ... Standards in genomic sciences 10, 1-6, 2015 | 406 | 2015 |
| IMG/M 4 version of the integrated metagenome comparative analysis system VM Markowitz, IMA Chen, K Chu, E Szeto, K Palaniappan, M Pillay, ... Nucleic acids research 42 (D1), D568-D573, 2014 | 315 | 2014 |
| An expression atlas of rice mRNAs and small RNAs K Nobuta, RC Venu, C Lu, A Beló, K Vemaraju, K Kulkarni, W Wang, ... Nature biotechnology 25 (4), 473-477, 2007 | 302 | 2007 |
| Genome-wide analysis for discovery of rice microRNAs reveals natural antisense microRNAs (nat-miRNAs) C Lu, DH Jeong, K Kulkarni, M Pillay, K Nobuta, R German, SR Thatcher, ... Proceedings of the National Academy of Sciences 105 (12), 4951-4956, 2008 | 255 | 2008 |
| Distinct size distribution of endogenous siRNAs in maize: Evidence from deep sequencing in the mop1-1 mutant K Nobuta, C Lu, R Shrivastava, M Pillay, E De Paoli, M Accerbi, ... Proceedings of the National Academy of Sciences 105 (39), 14958-14963, 2008 | 232 | 2008 |
| IMG/VR: a database of cultured and uncultured DNA Viruses and retroviruses D Paez-Espino, IMA Chen, K Palaniappan, A Ratner, K Chu, E Szeto, ... Nucleic acids research 45 (D1), gkw1030, 2016 | 211 | 2016 |
| Plant microRNAs display differential 3′ truncation and tailing modifications that are ARGONAUTE1 dependent and conserved across species J Zhai, Y Zhao, SA Simon, S Huang, K Petsch, S Arikit, M Pillay, L Ji, ... The Plant Cell 25 (7), 2417-2428, 2013 | 115 | 2013 |
| Genome data provides high support for generic boundaries in Burkholderia sensu lato CW Beukes, M Palmer, P Manyaka, WY Chan, JR Avontuur, E van Zyl, ... Frontiers in microbiology 8, 1154, 2017 | 97 | 2017 |
| Supporting community annotation and user collaboration in the integrated microbial genomes (IMG) system IMA Chen, VM Markowitz, K Palaniappan, E Szeto, K Chu, J Huang, ... BMC genomics 17, 1-16, 2016 | 59 | 2016 |
| Permanent draft genome of Thiobacillus thioparus DSM 505 T, an obligately chemolithoautotrophic member of the Betaproteobacteria LP Hutt, M Huntemann, A Clum, M Pillay, K Palaniappan, N Varghese, ... Standards in genomic sciences 12 (1), 1-8, 2017 | 46 | 2017 |
| Absence of genome reduction in diverse, facultative endohyphal bacteria DA Baltrus, K Dougherty, KR Arendt, M Huntemann, A Clum, M Pillay, ... Microbial Genomics 3 (2), 2017 | 37 | 2017 |
| Genomes of ubiquitous marine and hypersaline Hydrogenovibrio, Thiomicrorhabdus and Thiomicrospira spp. encode a diversity of mechanisms to sustain … KM Scott, J Williams, CMB Porter, S Russel, TL Harmer, JH Paul, ... Environmental microbiology 20 (8), 2686-2708, 2018 | 33 | 2018 |
| Complete genome sequence of Desulfurivibrio alkaliphilus strain AHT2 T, a haloalkaliphilic sulfidogen from Egyptian hypersaline alkaline lakes ED Melton, DY Sorokin, L Overmars, O Chertkov, A Clum, M Pillay, ... Standards in genomic sciences 11 (1), 1-9, 2016 | 31 | 2016 |
| Complete genome of Nitrosospira briensis C-128, an ammonia-oxidizing bacterium from agricultural soil MC Rice, JM Norton, F Valois, A Bollmann, PJ Bottomley, MG Klotz, ... Standards in genomic sciences 11 (1), 1-8, 2016 | 28 | 2016 |
| Draft genome sequence of Dethiobacter alkaliphilus strain AHT1T, a gram-positive sulfidogenic polyextremophile ED Melton, DY Sorokin, L Overmars, AL Lapidus, M Pillay, N Ivanova, ... Standards in genomic sciences 12, 1-9, 2017 | 21 | 2017 |
Nikos C KyrpidesJoint Genome Institute, Lawrence Berkeley National LaboratoryGeverifieerd e-mailadres voor lbl.gov
