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Tommy Tsan-Yuk Lam
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Early transmission dynamics in Wuhan, China, of novel coronavirus–infected pneumonia
Q Li, X Guan, P Wu, X Wang, L Zhou, Y Tong, R Ren, KSM Leung, ...
New England journal of medicine 382 (13), 1199-1207, 2020
212002020
ggtree: an r package for visualization and annotation of phylogenetic trees with their covariates and other associated data
G Yu, DK Smith, H Zhu, Y Guan, TTY Lam
Methods in Ecology and Evolution 8 (1), 28-36, 2017
32132017
Identifying SARS-CoV-2-related coronaviruses in Malayan pangolins
TTY Lam, N Jia, YW Zhang, MHH Shum, JF Jiang, HC Zhu, YG Tong, ...
Nature 583 (7815), 282-285, 2020
21232020
Exploring the temporal structure of heterochronous sequences using TempEst (formerly Path-O-Gen)
A Rambaut, TT Lam, L Max Carvalho, OG Pybus
Virus evolution 2 (1), vew007, 2016
16752016
The sequence and de novo assembly of the giant panda genome
R Li, W Fan, G Tian, H Zhu, L He, J Cai, Q Huang, Q Cai, B Li, Y Bai, ...
Nature 463 (7279), 311-317, 2010
13722010
Evolutionary origins of the SARS-CoV-2 sarbecovirus lineage responsible for the COVID-19 pandemic
MF Boni, P Lemey, X Jiang, TTY Lam, BW Perry, TA Castoe, A Rambaut, ...
Nature microbiology 5 (11), 1408-1417, 2020
10202020
Early transmissibility assessment of the N501Y mutant strains of SARS-CoV-2 in the United Kingdom, October to November 2020
K Leung, MHH Shum, GM Leung, TTY Lam, JT Wu
Eurosurveillance 26 (1), 2002106, 2021
7512021
The genesis and source of the H7N9 influenza viruses causing human infections in China
TTY Lam, J Wang, Y Shen, B Zhou, L Duan, CL Cheung, C Ma, SJ Lycett, ...
Nature 502 (7470), 241-244, 2013
5182013
Two Methods for Mapping and Visualizing Associated Data on Phylogeny Using Ggtree
G Yu, TTY Lam, H Zhu, Y Guan
Molecular biology and evolution 35 (12), 3041-3043, 2018
5172018
Co-circulation of three camel coronavirus species and recombination of MERS-CoVs in Saudi Arabia
JSM Sabir, TTY Lam, MMM Ahmed, L Li, Y Shen, S EM Abo-Aba, ...
Science 351 (6268), 81-84, 2016
4502016
Molecular epidemiology of PRRSV: a phylogenetic perspective
M Shi, TTY Lam, CC Hon, RKH Hui, KS Faaberg, T Wennblom, ...
Virus research 154 (1-2), 7-17, 2010
4042010
Phylogeny-based evolutionary, demographical, and geographical dissection of North American type 2 porcine reproductive and respiratory syndrome viruses
M Shi, TTY Lam, CC Hon, MP Murtaugh, PR Davies, RKH Hui, J Li, ...
Journal of virology 84 (17), 8700-8711, 2010
4042010
The ever-expanding diversity of porcine reproductive and respiratory syndrome virus
MP Murtaugh, T Stadejek, JE Abrahante, TTY Lam, FCC Leung
Virus research 154 (1-2), 18-30, 2010
3682010
Treeio: An R Package for Phylogenetic Tree Input and Output with Richly Annotated and Associated Data
LG Wang, TTY Lam, S Xu, Z Dai, L Zhou, T Feng, P Guo, CW Dunn, ...
Molecular biology and evolution 37 (2), 599-603, 2020
3592020
Molecular characterization of the fecal microbiota in patients with nonalcoholic steatohepatitis–a longitudinal study
VWS Wong, CH Tse, TTY Lam, GLH Wong, AML Chim, WCW Chu, ...
PloS one 8 (4), e62885, 2013
3522013
Identification of 2019-nCoV related coronaviruses in Malayan pangolins in southern China
TTY Lam, MHH Shum, HC Zhu, YG Tong, XB Ni, YS Liao, W Wei, ...
BioRxiv, 2020.02. 13.945485, 2020
2822020
Evolutionary genetics of human enterovirus 71: origin, population dynamics, natural selection, and seasonal periodicity of the VP1 gene
KK Tee, TTY Lam, YF Chan, JM Bible, A Kamarulzaman, CYW Tong, ...
Journal of virology 84 (7), 3339-3350, 2010
2782010
Evidence of the recombinant origin of a bat severe acute respiratory syndrome (SARS)-like coronavirus and its implications on the direct ancestor of SARS coronavirus
CC Hon, TY Lam, ZL Shi, AJ Drummond, CW Yip, F Zeng, PY Lam, ...
Journal of virology 82 (4), 1819-1826, 2008
2422008
The rapidly expanding CRF01_AE epidemic in China is driven by multiple lineages of HIV-1 viruses introduced in the 1990s
Y Feng, X He, JH Hsi, F Li, X Li, Q Wang, Y Ruan, H Xing, TTY Lam, ...
Aids 27 (11), 1793-1802, 2013
2372013
Dissemination, divergence and establishment of H7N9 influenza viruses in China
TTY Lam, B Zhou, J Wang, Y Chai, Y Shen, X Chen, C Ma, W Hong, ...
Nature 522 (7554), 102-105, 2015
2362015
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Articles 1–20