Todd Oakley

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M Sabrina PankeyUniversity of New HampshireVerified email at unh.edu
Markos A. AlexandrouPostdoctoral Researcher, University of California Santa BarbaraVerified email at lifesci.ucsb.edu
Daniel I SpeiserAssociate ProfessorVerified email at mailbox.sc.edu
David PlachetzkiUniversity of New HamphsireVerified email at unh.edu
Marc W CadotteUniversity of Toronto ScarboroughVerified email at utoronto.ca
Anita NarwaniGroup Leader, Eawag (Swiss Federal Institute of Aquatic Science and Technology)Verified email at eawag.ch
David TilmanProfessor of Ecology, University of Minnesota & Professor, Bren School UCSBVerified email at umn.edu
Ajna RiveraUniversity of the PacificVerified email at pacific.edu
Jeanne M SerbAssociate Professor, Evolutionary Biology, Iowa State UniversityVerified email at iastate.edu
M. Desmond RamirezUniversity of Massachusetts-AmherstVerified email at umass.edu
Kenneth S. Kosik UC Santa BarbaraVerified email at lifesci.ucsb.edu
Kevin E. OmlandProfessor, Department of Biological Sciences, EandE@UMBC, University of Maryland, Baltimore CountyVerified email at umbc.edu
Steven W. KembelUniversité du Québec à Montréal (UQAM)Verified email at uqam.ca
Joanna M. WolfeHarvard UniversityVerified email at g.harvard.edu
Michael R. RoseDistinguished Professor of Biological Sciences, University of California, IrvineVerified email at uci.edu
Nuri OzturkProfessor @ Gebze Technical UniversityVerified email at gtu.edu.tr
Bjørn ØstmanGro IntelligenceVerified email at gro-intelligence.com
Arne MooersSimon Fraser UniversityVerified email at sfu.ca
Stephen ProulxUCSBVerified email at lifesci.ucsb.edu
Onur SakaryaStaff Bioinformatics Scientist, GRAIL Inc.Verified email at grailbio.com

Todd Oakley

Professor of Ecology Evolution and Marine Biology, University of California Santa Barbara

Verified email at ucsb.edu - Homepage

Macroevolution Phylogenetics Invertebrate Zoology Bioluminescence Opsin


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The ecoresponsive genome of Daphnia pulex JK Colbourne, ME Pfrender, D Gilbert, WK Thomas, A Tucker, TH Oakley, ... Science 331 (6017), 555, 2011	1295	2011
The Amphimedon queenslandica genome and the evolution of animal complexity M Srivastava, O Simakov, J Chapman, B Fahey, MEA Gauthier, T Mitros, ... Nature 466 (7307), 720-726, 2010	1059	2010
Using phylogenetic, functional and trait diversity to understand patterns of plant community productivity MW Cadotte, J Cavender-Bares, D Tilman, TH Oakley PLoS One 4 (5), e5695, 2009	722	2009
Evolutionary history and the effect of biodiversity on plant productivity MW Cadotte, BJ Cardinale, TH Oakley Proceedings of the National Academy of Sciences 105 (44), 17012, 2008	624	2008
Reconstructing ancestral character states: a critical reappraisal CW Cunningham, KE Omland, TH Oakley Trends in Ecology & Evolution 13 (9), 361-366, 1998	579	1998
Phylogenetic diversity metrics for ecological communities: integrating species richness, abundance and evolutionary history MW Cadotte, T Jonathan Davies, J Regetz, SW Kembel, E Cleland, ... Ecology letters 13 (1), 96-105, 2010	401	2010
A post-synaptic scaffold at the origin of the animal kingdom O Sakarya, KA Armstrong, M Adamska, M Adamski, IF Wang, B Tidor, ... PLoS One 2 (6), e506, 2007	277	2007
Phylotranscriptomics to bring the understudied into the fold: monophyletic Ostracoda, fossil placement, and pancrustacean phylogeny TH Oakley, JM Wolfe, AR Lindgren, AK Zaharoff Molecular biology and evolution 30 (1), 215-233, 2013	246	2013
Independent contrasts succeed where ancestor reconstruction fails in a known bacteriophage phylogeny TH Oakley, CW Cunningham Evolution 54 (2), 397-405, 2000	187	2000
Experimental evidence that evolutionary relatedness does not affect the ecological mechanisms of coexistence in freshwater green algae A Narwani, MA Alexandrou, TH Oakley, IT Carroll, BJ Cardinale Ecology Letters 16 (11), 1373-1381, 2013	181	2013
Molecular phylogenetic evidence for the independent evolutionary origin of an arthropod compound eye TH Oakley, CW Cunningham Proceedings of the National Academy of Sciences 99 (3), 1426, 2002	175	2002
Phylogeny of salmonine fishes based on growth hormone introns: Atlantic (Salmo) and Pacific (Oncorhynchus) salmon are not sister taxa TH Oakley, RB Phillips Molecular Phylogenetics and Evolution 11 (3), 381-393, 1999	161	1999
Species richness, but not phylogenetic diversity, influences community biomass production and temporal stability in a re‐examination of 16 grassland biodiversity studies P Venail, K Gross, TH Oakley, A Narwani, E Allan, P Flombaum, F Isbell, ... Functional Ecology 29 (5), 615-626, 2015	146	2015
The origins of novel protein interactions during animal opsin evolution DC Plachetzki, BM Degnan, TH Oakley PLoS One 2 (10), e1054, 2007	145	2007
Molecular evolution of bat color vision genes D Wang, T Oakley, J Mower, LC Shimmin, S Yim, RL Honeycutt, H Tsao, ... Molecular Biology and Evolution 21 (2), 295-302, 2004	131	2004
A multi-gene phylogeny of Cephalopoda supports convergent morphological evolution in association with multiple habitat shifts in the marine environment AR Lindgren, MS Pankey, FG Hochberg, TH Oakley BMC evolutionary biology 12 (1), 1-15, 2012	111	2012
Eye-independent, light-activated chromatophore expansion (LACE) and expression of phototransduction genes in the skin of Octopus bimaculoides MD Ramirez, TH Oakley The Journal of experimental biology 218 (10), 1513-1520, 2015	110	2015
Genome duplication and multiple evolutionary origins of complex migratory behavior in Salmonidae MA Alexandrou, BA Swartz, NJ Matzke, TH Oakley Molecular phylogenetics and evolution 69 (3), 514-523, 2013	109	2013
Symbiotic organs shaped by distinct modes of genome evolution in cephalopods M Belcaid, G Casaburi, SJ McAnulty, H Schmidbaur, AM Suria, ... Proceedings of the National Academy of Sciences 116 (8), 3030-3035, 2019	108	2019
The new biology: beyond the modern synthesis MR Rose, TH Oakley Biology direct 2, 1-17, 2007	107	2007

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