| Insights into the phylogeny and coding potential of microbial dark matter C Rinke, P Schwientek, A Sczyrba, NN Ivanova, IJ Anderson, JF Cheng, ... Nature 499 (7459), 431-437, 2013 | 1661 | 2013 |
| Metagenomic discovery of biomass-degrading genes and genomes from cow rumen M Hess, A Sczyrba, R Egan, TW Kim, H Chokhawala, G Schroth, S Luo, ... Science 331 (6016), 463-467, 2011 | 1170 | 2011 |
| Assembling single-cell genomes and mini-metagenomes from chimeric MDA products S Nurk, A Bankevich, D Antipov, AA Gurevich, A Korobeynikov, A Lapidus, ... Journal of Computational Biology 20 (10), 714-737, 2013 | 771 | 2013 |
| Improving the coverage of the cyanobacterial phylum using diversity-driven genome sequencing PM Shih, D Wu, A Latifi, SD Axen, DP Fewer, E Talla, A Calteau, F Cai, ... Proceedings of the National Academy of Sciences 110 (3), 1053-1058, 2013 | 654 | 2013 |
| Airway microbiota and bronchial hyperresponsiveness in patients with suboptimally controlled asthma YJ Huang, CE Nelson, EL Brodie, TZ DeSantis, MS Baek, J Liu, T Woyke, ... Journal of Allergy and Clinical Immunology 127 (2), 372-381. e3, 2011 | 571 | 2011 |
| IMG 4 version of the integrated microbial genomes comparative analysis system VM Markowitz, IMA Chen, K Palaniappan, K Chu, E Szeto, M Pillay, ... Nucleic acids research 42 (D1), D560-D567, 2014 | 544 | 2014 |
| Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea RM Bowers, NC Kyrpides, R Stepanauskas, M Harmon-Smith, D Doud, ... Nature biotechnology 35 (8), 725-731, 2017 | 514 | 2017 |
| Functional characteristics of an endophyte community colonizing rice roots as revealed by metagenomic analysis A Sessitsch, P Hardoim, J Döring, A Weilharter, A Krause, T Woyke, ... Molecular Plant-Microbe Interactions 25 (1), 28-36, 2012 | 507 | 2012 |
| Metagenome, metatranscriptome and single-cell sequencing reveal microbial response to Deepwater Horizon oil spill OU Mason, TC Hazen, S Borglin, PSG Chain, EA Dubinsky, JL Fortney, ... The ISME journal 6 (9), 1715-1727, 2012 | 471 | 2012 |
| Potential for chemolithoautotrophy among ubiquitous bacteria lineages in the dark ocean BK Swan, M Martinez-Garcia, CM Preston, A Sczyrba, T Woyke, D Lamy, ... Science 333 (6047), 1296-1300, 2011 | 462 | 2011 |
| Symbiosis insights through metagenomic analysis of a microbial consortium T Woyke, H Teeling, NN Ivanova, M Huntemann, M Richter, FO Gloeckner, ... Nature 443 (7114), 950-955, 2006 | 462 | 2006 |
| Assembling genomes and mini-metagenomes from highly chimeric reads S Nurk, A Bankevich, D Antipov, A Gurevich, A Korobeynikov, A Lapidus, ... Annual International Conference on Research in Computational Molecular …, 2013 | 458 | 2013 |
| IMG/M v. 5.0: an integrated data management and comparative analysis system for microbial genomes and microbiomes IMA Chen, K Chu, K Palaniappan, M Pillay, A Ratner, J Huang, ... Nucleic acids research 47 (D1), D666-D677, 2019 | 389 | 2019 |
| Critical assessment of metagenome interpretation—a benchmark of metagenomics software A Sczyrba, P Hofmann, P Belmann, D Koslicki, S Janssen, J Dröge, ... Nature methods 14 (11), 1063-1071, 2017 | 382 | 2017 |
| Assembling the marine metagenome, one cell at a time T Woyke, G Xie, A Copeland, JM Gonzalez, C Han, H Kiss, JH Saw, ... PloS one 4 (4), e5299, 2009 | 360 | 2009 |
| Plant compartment and biogeography affect microbiome composition in cultivated and native Agave species D Coleman‐Derr, D Desgarennes, C Fonseca‐Garcia, S Gross, ... New Phytologist 209 (2), 798-811, 2016 | 350 | 2016 |
| Primer and platform effects on 16S rRNA tag sequencing J Tremblay, K Singh, A Fern, ES Kirton, S He, T Woyke, J Lee, F Chen, ... Frontiers in microbiology 6, 771, 2015 | 346 | 2015 |
| Gene expression profile of glioblastoma multiforme invasive phenotype points to new therapeutic targets DB Hoelzinger, L Mariani, J Weis, T Woyke, TJ Berens, WS McDonough, ... Neoplasia 7 (1), 7-16, 2005 | 330 | 2005 |
| Prevalent genome streamlining and latitudinal divergence of planktonic bacteria in the surface ocean BK Swan, B Tupper, A Sczyrba, FM Lauro, M Martinez-Garcia, ... Proceedings of the National Academy of Sciences 110 (28), 11463-11468, 2013 | 295 | 2013 |
| Viral dark matter and virus–host interactions resolved from publicly available microbial genomes S Roux, SJ Hallam, T Woyke, MB Sullivan elife 4, e08490, 2015 | 266 | 2015 |
Nikos C KyrpidesJoint Genome Institute, Lawrence Berkeley National LaboratoryGeverifieerd e-mailadres voor lbl.gov
