Song Liu
Song Liu
Professor & Vice Chair, Director of Bioinformatics, Roswell Park Comprehensive Cancer Center
Verified email at - Homepage
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A draft sequence of the rice genome (Oryza sativa L. ssp. indica)
J Yu, S Hu, J Wang, GKS Wong, S Li, B Liu, Y Deng, L Dai, Y Zhou, ...
science 296 (5565), 79-92, 2002
A pilot study of circulating miRNAs as potential biomarkers of early stage breast cancer
H Zhao, J Shen, L Medico, D Wang, CB Ambrosone, S Liu
PLoS One 5 (10), e13735, 2010
IMA: an R package for high-throughput analysis of Illumina's 450K Infinium methylation data
D Wang, L Yan, Q Hu, LE Sucheston, MJ Higgins, CB Ambrosone, ...
Bioinformatics 28 (5), 729-730, 2012
A knowledge-based energy function for protein-ligand, protein-protein, and protein-DNA complexes
C Zhang, S Liu, Q Zhu, Y Zhou
Journal of medicinal chemistry 48 (7), 2325-2335, 2005
Protein binding site prediction using an empirical scoring function
S Liang, C Zhang, S Liu, Y Zhou
Nucleic acids research 34 (13), 3698-3707, 2006
Elf5 inhibits the epithelial–mesenchymal transition in mammary gland development and breast cancer metastasis by transcriptionally repressing Snail2
R Chakrabarti, J Hwang, MA Blanco, Y Wei, M Lukačišin, RA Romano, ...
Nature cell biology 14 (11), 1212-1222, 2012
Myeloid-derived suppressor cell development is regulated by a STAT/IRF-8 axis
JD Waight, C Netherby, ML Hensen, A Miller, Q Hu, S Liu, PN Bogner, ...
The Journal of clinical investigation 123 (10), 4464-4478, 2013
Tumor-derived G-CSF facilitates neoplastic growth through a granulocytic myeloid-derived suppressor cell-dependent mechanism
JD Waight, Q Hu, A Miller, S Liu, SI Abrams
PloS one 6 (11), e27690, 2011
Replication of associations between genetic polymorphisms and chronic graft-versus-host disease
PJ Martin, W Fan, BE Storer, DM Levine, LP Zhao, EH Warren, ...
Blood, blood-2016-07-728063, 2016
A physical reference state unifies the structure‐derived potential of mean force for protein folding and binding
S Liu, C Zhang, H Zhou, Y Zhou
Proteins: Structure, Function, and Bioinformatics 56 (1), 93-101, 2004
An accurate, residue‐level, pair potential of mean force for folding and binding based on the distance‐scaled, ideal‐gas reference state
C Zhang, S Liu, H Zhou, Y Zhou
Protein science 13 (2), 400-411, 2004
A comparison of RNA-Seq and high-density exon array for detecting differential gene expression between closely related species
S Liu, L Lin, P Jiang, D Wang, Y Xing
Nucleic acids research 39 (2), 578-588, 2011
Intratumoral and Intertumoral Genomic Heterogeneity of Multifocal Localized Prostate Cancer Impacts Molecular Classifications and Genomic Prognosticators
L Wei, J Wang, E Lampert, S Schlanger, AD DePriest, Q Hu, EC Gomez, ...
European Urology, 2016
Nrf2 Amplifies Oxidative Stress via Induction of Klf9
SN Zucker, EE Fink, A Bagati, S Mannava, A Bianchi-Smiraglia, ...
Molecular cell 53 (6), 916-928, 2014
Accurate and efficient loop selections by the DFIRE‐based all‐atom statistical potential
CHI Zhang, S Liu, Y Zhou
Protein Science 13 (2), 391-399, 2004
Association of serum level of vitamin D at diagnosis with breast cancer survival: a case-cohort analysis in the pathways study
S Yao, ML Kwan, IJ Ergas, JM Roh, TYD Cheng, CC Hong, SE McCann, ...
JAMA oncology 3 (3), 351-357, 2017
Facilitates Chromatin Transcription Complex Is an ‘‘Accelerator’’of Tumor Transformation and Potential Marker and Target of Aggressive Cancers
H Garcia, JC Miecznikowski, A Safina, M Commane, A Ruusulehto, ...
Cell reports 4 (1), 159-173, 2013
Fold recognition by concurrent use of solvent accessibility and residue depth
S Liu, C Zhang, S Liang, Y Zhou
Proteins: Structure, Function, and Bioinformatics 68 (3), 636-645, 2007
Whole-genome sequencing identifies genomic heterogeneity at a nucleotide and chromosomal level in bladder cancer
CD Morrison, P Liu, A Woloszynska-Read, J Zhang, W Luo, M Qin, ...
Proceedings of the National Academy of Sciences 111 (6), E672-E681, 2014
Nanog reverses the effects of organismal aging on mesenchymal stem cell proliferation and myogenic differentiation potential
J Han, P Mistriotis, P Lei, D Wang, S Liu, ST Andreadis
Stem Cells 30 (12), 2746-2759, 2012
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