Miguel Rocha

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96 artikelen

16 artikelen

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Medeauteurs

Isabel RochaITQB NOVA - Universidade NOVA de LisboaGeverifieerd e-mailadres voor itqb.unl.pt
Eugénio Campos FerreiraProfessor of Biological Engineering, Universidade do MinhoGeverifieerd e-mailadres voor deb.uminho.pt
Paulo CortezFull Professor, ALGORITMI, Department Information Systems, University of MinhoGeverifieerd e-mailadres voor dsi.uminho.pt
Paulo MaiaSilicoLife SAGeverifieerd e-mailadres voor silicolife.com
Jose Carlos Ferreira Maia NevesProfessor of Computer Science, The University of MinhoGeverifieerd e-mailadres voor di.uminho.pt
Marcelo MaraschinUniversidade Federal de Santa CatarinaGeverifieerd e-mailadres voor ufsc.br
Miguel RioProfessor of Computer NetworksGeverifieerd e-mailadres voor ucl.ac.uk
Oscar DiasUniversity of MinhoGeverifieerd e-mailadres voor deb.uminho.pt
Florentino Fdez-RiverolaProfessor, Computer Science Department, University of VigoGeverifieerd e-mailadres voor uvigo.es
Rui MendesAlgoritmi, DI, Universidade do MinhoGeverifieerd e-mailadres voor di.uminho.pt
Virgilio Gavicho UarrotaPONTIFICIA UNIVERSIDAD CATOLICA DE VALPARAISOGeverifieerd e-mailadres voor posgrad.ufsc.br
José P. FariaAssistant Computational BiologistGeverifieerd e-mailadres voor anl.gov
Kiran Raosaheb PatilMRC Toxicology Unit, University of CambridgeGeverifieerd e-mailadres voor cam.ac.uk
Julio Saez RodriguezHeidelberg UniversityGeverifieerd e-mailadres voor uni-heidelberg.de
Bruno M. CostaLife and Health Sciences Research Institute (ICVS), School of Medicine, University of MinhoGeverifieerd e-mailadres voor med.uminho.pt
Daniel MachadoNorwegian University of Science and TechnologyGeverifieerd e-mailadres voor ntnu.no
Jens NielsenProfessor in Systems Biology, Chalmers University of Technology, SwedenGeverifieerd e-mailadres voor chalmers.se
Christopher HenryComputational Biologist, Argonne National LaboratoryGeverifieerd e-mailadres voor mcs.anl.gov
Adam Paul ArkinDepartment of Bioengineering, University of California, Berkeley, Physical Biosciences Division, E.OGeverifieerd e-mailadres voor lbl.gov
Luis M. RochaGeorge J. Klir Professor of Systems Science and Industrial Engineering, Binghamton University (SUNY)Geverifieerd e-mailadres voor binghamton.edu

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Miguel Rocha

Associate Professor, Dept. Informatics and Centre Biological Engineering, Universidade do Minho

Geverifieerd e-mailadres voor di.uminho.pt

Bioinformatics Evolutionary Computation Systems Biology Machine Learning Neural Networks


Titel Sorteren op citaties Sorteren op jaar Sorteren op titel	Geciteerd door Geciteerd door	Jaar
OptFlux: an open-source software platform for in silico metabolic engineering I Rocha, P Maia, P Evangelista, P Vilaça, S Soares, JP Pinto, J Nielsen, ... BMC systems biology 4, 1-12, 2010	474	2010
Particle swarms for feedforward neural network training R Mendes, P Cortez, M Rocha, J Neves Proceedings of the 2002 International Joint Conference on Neural Networks …, 2002	421	2002
Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen MP Menden, D Wang, MJ Mason, B Szalai, KC Bulusu, Y Guan, T Yu, ... Nature communications 10 (1), 2674, 2019	273	2019
Multi‐scale Internet traffic forecasting using neural networks and time series methods P Cortez, M Rio, M Rocha, P Sousa Expert Systems 29 (2), 143-155, 2012	250	2012
Modeling formalisms in systems biology D Machado, RS Costa, M Rocha, EC Ferreira, B Tidor, I Rocha AMB express 1, 1-14, 2011	241	2011
Internet traffic forecasting using neural networks P Cortez, M Rio, M Rocha, P Sousa The 2006 IEEE international joint conference on neural network proceedings …, 2006	177	2006
Reconstructing genome-scale metabolic models with merlin O Dias, M Rocha, EC Ferreira, I Rocha Nucleic acids research 43 (8), 3899-3910, 2015	171	2015
Prediction of overall survival for patients with metastatic castration-resistant prostate cancer: development of a prognostic model through a crowdsourced challenge with open … J Guinney, T Wang, TD Laajala, KK Winner, JC Bare, EC Neto, SA Khan, ... The Lancet Oncology 18 (1), 132-142, 2017	161	2017
Metabolomics combined with chemometric tools (PCA, HCA, PLS-DA and SVM) for screening cassava (Manihot esculenta Crantz) roots during postharvest physiological deterioration VG Uarrota, R Moresco, B Coelho, E da Costa Nunes, LAM Peruch, ... Food Chemistry 161, 67-78, 2014	152	2014
Deep learning for drug response prediction in cancer D Baptista, PG Ferreira, M Rocha Briefings in bioinformatics 22 (1), 360-379, 2021	149	2021
Preventing premature convergence to local optima in genetic algorithms via random offspring generation M Rocha, J Neves Multiple Approaches to Intelligent Systems: 12th International Conference on …, 1999	145	1999
Evolution of neural networks for classification and regression M Rocha, P Cortez, J Neves Neurocomputing 70 (16-18), 2809-2816, 2007	139	2007
In Silico Constraint-Based Strain Optimization Methods: the Quest for Optimal Cell Factories P Maia, M Rocha, I Rocha Microbiology and Molecular Biology Reviews 80 (1), 45-67, 2016	135	2016
Natural computation meta-heuristics for the in silico optimization of microbial strains M Rocha, P Maia, R Mendes, JP Pinto, EC Ferreira, J Nielsen, KR Patil, ... BMC bioinformatics 9, 1-16, 2008	130	2008
Evolving time series forecasting ARMA models P Cortez, M Rocha, J Neves Journal of Heuristics 10, 415-429, 2004	116	2004
Bridging the layers: towards integration of signal transduction, regulation and metabolism into mathematical models E Gonçalves, J Bucher, A Ryll, J Niklas, K Mauch, S Klamt, M Rocha, ... Molecular BioSystems 9 (7), 1576-1583, 2013	111	2013
Transcript level and sequence determinants of protein abundance and noise in Escherichia coli JC Guimaraes, M Rocha, AP Arkin Nucleic acids research 42 (8), 4791-4799, 2014	110	2014
Causal integration of multi‐omics data with prior knowledge to generate mechanistic hypotheses A Dugourd, C Kuppe, M Sciacovelli, E Gjerga, A Gabor, KB Emdal, ... Molecular Systems Biology 17 (1), e9730, 2021	106	2021
The role of ascorbate peroxidase, guaiacol peroxidase, and polysaccharides in cassava (Manihot esculenta Crantz) roots under postharvest physiological deterioration VG Uarrota, R Moresco, EC Schmidt, ZL Bouzon, E da Costa Nunes, ... Food chemistry 197, 737-746, 2016	89	2016
Generative deep learning for targeted compound design T Sousa, J Correia, V Pereira, M Rocha Journal of Chemical Information and Modeling 61 (11), 5343-5361, 2021	87	2021

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