| Sequential bottlenecks drive viral evolution in early acute hepatitis C virus infection RA Bull, F Luciani, K McElroy, S Gaudieri, ST Pham, A Chopra, ... PLoS pathogens 7 (9), e1002243, 2011 | 298 | 2011 |
| HLA-A* 32: 01 is strongly associated with vancomycin-induced drug reaction with eosinophilia and systemic symptoms KC Konvinse, JA Trubiano, R Pavlos, I James, CM Shaffer, CA Bejan, ... Journal of allergy and clinical immunology 144 (1), 183-192, 2019 | 142 | 2019 |
| Reducing chimera formation during PCR amplification to ensure accurate genotyping RP Smyth, TE Schlub, A Grimm, V Venturi, A Chopra, S Mallal, ... Gene 469 (1-2), 45-51, 2010 | 135 | 2010 |
| HIV integration sites in latently infected cell lines: evidence of ongoing replication J Symons, A Chopra, E Malatinkova, W De Spiegelaere, S Leary, ... Retrovirology 14, 1-11, 2017 | 79 | 2017 |
| Effect of immune pressure on hepatitis C virus evolution: insights from a single-source outbreak S Merani, D Petrovic, I James, A Chopra, D Cooper, E Freitas, A Rauch, ... Hepatology 53 (2), 396-405, 2011 | 75 | 2011 |
| Interaction of the nucleation processes occurring at adjacent nucleation sites RL Judd, A Chopra | 75 | 1993 |
| Identifying recombination hot spots in the HIV-1 genome RP Smyth, TE Schlub, AJ Grimm, C Waugh, P Ellenberg, A Chopra, ... Journal of virology 88 (5), 2891-2902, 2014 | 59 | 2014 |
| Generation of a novel SARS-CoV-2 sub-genomic RNA due to the R203K/G204R variant in nucleocapsid: homologous recombination has potential to change SARS-CoV-2 at both protein and … S Leary, S Gaudieri, MD Parker, A Chopra, I James, S Pakala, E Alves, ... Pathogens and Immunity 6 (2), 27, 2021 | 58 | 2021 |
| Viral adaptation to host immune responses occurs in chronic hepatitis B virus (HBV) infection, and adaptation is greatest in HBV e antigen-negative disease CP Desmond, S Gaudieri, IR James, K Pfafferott, A Chopra, GK Lau, ... Journal of Virology 86 (2), 1181-1192, 2012 | 55 | 2012 |
| Tumor Infiltrating Effector Memory Antigen-Specific CD8+ T Cells Predict Response to Immune Checkpoint Therapy N Principe, J Kidman, S Goh, CM Tilsed, SA Fisher, VS Fear, CA Forbes, ... Frontiers in Immunology 11, 584423, 2020 | 53 | 2020 |
| The human transcription enhancer factor-1, TEF-1, can substitute for Drosophila scalloped during wingblade development N Deshpande, A Chopra, A Rangarajan, LS Shashidhara, V Rodrigues, ... Journal of Biological Chemistry 272 (16), 10664-10668, 1997 | 53 | 1997 |
| HIV escape mutations occur preferentially at HLA-binding sites of CD8 T-cell epitopes C Bronke, CAM Almeida, E McKinnon, SG Roberts, NM Keane, A Chopra, ... Aids 27 (6), 899-905, 2013 | 51 | 2013 |
| Adaptive interactions between HLA and HIV-1: highly divergent selection imposed by HLA class I molecules with common supertype motifs M John, D Heckerman, I James, LP Park, JM Carlson, A Chopra, ... The Journal of Immunology 184 (8), 4368-4377, 2010 | 51 | 2010 |
| Cytomegalovirus (CMV) Epitope–Specific CD4+ T Cells Are Inflated in HIV+ CMV+ Subjects CO Abana, MA Pilkinton, S Gaudieri, A Chopra, WJ McDonnell, ... The Journal of Immunology 199 (9), 3187-3201, 2017 | 50 | 2017 |
| Subgenomic RNA identification in SARS-CoV-2 genomic sequencing data MD Parker, BB Lindsey, S Leary, S Gaudieri, A Chopra, M Wyles, ... Genome research 31 (4), 645-658, 2021 | 48 | 2021 |
| Fifteen to twenty percent of HIV substitution mutations are associated with recombination TE Schlub, AJ Grimm, RP Smyth, D Cromer, A Chopra, S Mallal, V Venturi, ... Journal of virology 88 (7), 3837-3849, 2014 | 48 | 2014 |
| Shared peptide binding of HLA Class I and II alleles associate with cutaneous nevirapine hypersensitivity and identify novel risk alleles R Pavlos, EJ McKinnon, DA Ostrov, B Peters, S Buus, D Koelle, A Chopra, ... Scientific reports 7 (1), 8653, 2017 | 47 | 2017 |
| Transmitted/Founder Viruses Rapidly Escape from CD8+ T Cell Responses in Acute Hepatitis C Virus Infection RA Bull, P Leung, S Gaudieri, P Deshpande, B Cameron, M Walker, ... Journal of virology 89 (10), 5478-5490, 2015 | 47 | 2015 |
| High‐avidity, high‐IFNγ‐producing CD8 T‐cell responses following immune selection during HIV‐1 infection NM Keane, SG Roberts, CAM Almeida, T Krishnan, A Chopra, E Demaine, ... Immunology and cell biology 90 (2), 224-234, 2012 | 44 | 2012 |
| Prognostic value of HLA-I homozygosity in patients with non-small cell lung cancer treated with single agent immunotherapy A Abed, L Calapre, J Lo, S Correia, S Bowyer, A Chopra, M Watson, ... Journal for ImmunoTherapy of Cancer 8 (2), 2020 | 38 | 2020 |
