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Joshua E Babiarz
Joshua E Babiarz
Associate Director, Veracyte
Verified email at veracyte.com
Title
Cited by
Cited by
Year
Mouse ES cells express endogenous shRNAs, siRNAs, and other Microprocessor-independent, Dicer-dependent small RNAs
JE Babiarz, JG Ruby, Y Wang, DP Bartel, R Blelloch
Genes & development 22 (20), 2773-2785, 2008
11042008
Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
HR Chiang, LW Schoenfeld, JG Ruby, VC Auyeung, N Spies, D Baek, ...
Genes & development 24 (10), 992-1009, 2010
9532010
Embryonic stem cell–specific microRNAs promote induced pluripotency
RL Judson, JE Babiarz, M Venere, R Blelloch
Nature biotechnology 27 (5), 459-461, 2009
9502009
Embryonic stem cell–specific microRNAs regulate the G1-S transition and promote rapid proliferation
Y Wang, S Baskerville, A Shenoy, JE Babiarz, L Baehner, R Blelloch
Nature genetics 40 (12), 1478-1483, 2008
7972008
MicroRNA-29 regulates T-box transcription factors and interferon-γ production in helper T cells
DF Steiner, MF Thomas, JK Hu, Z Yang, JE Babiarz, CDC Allen, ...
Immunity 35 (2), 169-181, 2011
4332011
Expanding the scope of noninvasive prenatal testing: detection of fetal microdeletion syndromes
RJ Wapner, JE Babiarz, B Levy, M Stosic, B Zimmermann, S Sigurjonsson, ...
American journal of obstetrics and gynecology 212 (3), 332. e1-332. e9, 2015
3782015
Performance of a genomic sequencing classifier for the preoperative diagnosis of cytologically indeterminate thyroid nodules
KN Patel, TE Angell, J Babiarz, NM Barth, T Blevins, QY Duh, ...
JAMA surgery 153 (9), 817-824, 2018
3252018
Estimating the risk of drug-induced proarrhythmia using human induced pluripotent stem cell–derived cardiomyocytes
L Guo, RMC Abrams, JE Babiarz, JD Cohen, S Kameoka, MJ Sanders, ...
Toxicological Sciences 123 (1), 281-289, 2011
3112011
Telomeric heterochromatin boundaries require NuA4-dependent acetylation of histone variant H2A. Z in Saccharomycescerevisiae
JE Babiarz, JE Halley, J Rine
Genes & development 20 (6), 700-710, 2006
2522006
Targeted gene addition to a predetermined site in the human genome using a ZFN-based nicking enzyme
J Wang, G Friedman, Y Doyon, NS Wang, CJ Li, JC Miller, KL Hua, JJ Yan, ...
Genome research 22 (7), 1316-1326, 2012
1702012
A role for noncanonical microRNAs in the mammalian brain revealed by phenotypic differences in Dgcr8 versus Dicer1 knockouts and small RNA sequencing
JE Babiarz, R Hsu, C Melton, M Thomas, EM Ullian, R Blelloch
Rna 17 (8), 1489-1501, 2011
1402011
Detection of clonal and subclonal copy-number variants in cell-free DNA from patients with breast cancer using a massively multiplexed PCR methodology
E Kirkizlar, B Zimmermann, T Constantin, R Swenerton, B Hoang, ...
Translational oncology 8 (5), 407-416, 2015
1352015
Clinical experience with single‐nucleotide polymorphism‐based non‐invasive prenatal screening for 22q11. 2 deletion syndrome
SJ Gross, M Stosic, DM McDonald‐McGinn, AS Bassett, A Norvez, ...
Ultrasound in Obstetrics & Gynecology 47 (2), 177-183, 2016
1342016
Improved specificity of TALE-based genome editing using an expanded RVD repertoire
JC Miller, L Zhang, DF Xia, JJ Campo, IV Ankoudinova, DY Guschin, ...
Nature methods 12 (5), 465-471, 2015
1152015
The flavoring agent dihydrocoumarin reverses epigenetic silencing and inhibits sirtuin deacetylases
AJ Olaharski, J Rine, BL Marshall, J Babiarz, L Zhang, E Verdin, MT Smith
PLoS genetics 1 (6), e77, 2005
1122005
Determination of the human cardiomyocyte mRNA and miRNA differentiation network by fine-scale profiling
JE Babiarz, M Ravon, S Sridhar, P Ravindran, B Swanson, H Bitter, ...
Stem cells and development 21 (11), 1956-1965, 2012
1012012
Use of human stem cell derived cardiomyocytes to examine sunitinib mediated cardiotoxicity and electrophysiological alterations
JD Cohen, JE Babiarz, RM Abrams, L Guo, S Kameoka, E Chiao, ...
Toxicology and applied pharmacology 257 (1), 74-83, 2011
922011
Eri1 regulates microRNA homeostasis and mouse lymphocyte development and antiviral function
MF Thomas, S Abdul-Wajid, M Panduro, JE Babiarz, M Rajaram, ...
Blood, The Journal of the American Society of Hematology 120 (1), 130-142, 2012
772012
A high-throughput screen for teratogens using human pluripotent stem cells
S Kameoka, J Babiarz, K Kolaja, E Chiao
toxicological sciences 137 (1), 76-90, 2014
752014
Detecting mutations and ploidy in chromosomal segments
J Babiarz, TP Constantin, LA Eubank, G Gemelos, MM Hill, HE Kirkizlar, ...
US Patent 10,179,937, 2019
682019
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