Systematic analysis of dark and camouflaged genes reveals disease-relevant genes hiding in plain sight MTW Ebbert, TD Jensen, K Jansen-West, JP Sens, JS Reddy, PG Ridge, ... Genome biology 20, 1-23, 2019 | 152 | 2019 |
Ultrarapid nanopore genome sequencing in a critical care setting JE Gorzynski, SD Goenka, K Shafin, TD Jensen, DG Fisk, ME Grove, ... New England Journal of Medicine 386 (7), 700-702, 2022 | 148 | 2022 |
Accelerated identification of disease-causing variants with ultra-rapid nanopore genome sequencing SD Goenka, JE Gorzynski, K Shafin, DG Fisk, T Pesout, TD Jensen, ... Nature Biotechnology 40 (7), 1035-1041, 2022 | 49 | 2022 |
Culture shock: microglial heterogeneity, activation, and disrupted single-cell microglial networks in vitro MP Cadiz, TD Jensen, JP Sens, K Zhu, WM Song, B Zhang, M Ebbert, ... Molecular Neurodegeneration 17 (1), 26, 2022 | 34 | 2022 |
Clusterin ameliorates tau pathology in vivo by inhibiting fibril formation AM Wojtas, Y Carlomagno, JP Sens, SS Kang, TD Jensen, A Kurti, ... Acta Neuropathologica Communications 8, 1-11, 2020 | 28 | 2020 |
Beyond the exome: what’s next in diagnostic testing for Mendelian conditions MH Wojcik, CM Reuter, S Marwaha, M Mahmoud, MH Duyzend, ... The American Journal of Human Genetics 110 (8), 1229-1248, 2023 | 25 | 2023 |
Analysis of identification method for bacterial species and antibiotic resistance genes using optical data from DNA oligomers RL Wood, T Jensen, C Wadsworth, M Clement, P Nagpal, WG Pitt Frontiers in Microbiology 11, 496905, 2020 | 9 | 2020 |
Widespread choroid plexus contamination in sampling and profiling of brain tissue KC Olney, KT Todd, PN Pallegar, TD Jensen, MP Cadiz, KA Gibson, ... Molecular psychiatry 27 (3), 1839-1847, 2022 | 8 | 2022 |
APOE loss-of-function variants: Compatible with longevity and associated with resistance to Alzheimer’s Disease pathology A Chemparathy, Y Le Guen, S Chen, EG Lee, L Leong, JE Gorzynski, ... Neuron 112 (7), 1110-1116. e5, 2024 | 5 | 2024 |
Nanopore sequencing of 1000 Genomes Project samples to build a comprehensive catalog of human genetic variation JA Gustafson, SB Gibson, N Damaraju, MPG Zalusky, K Hoekzema, ... medRxiv, 2024.03. 05.24303792, 2024 | 4 | 2024 |
The PepSeq Pipeline: Software for antimicrobial motif discovery in randomly-generated peptide libraries TD Jensen, KA Bresciano, E Dallon, MS Fujimoto, CA Lyman, E Stewart, ... Proceedings of the 2018 ACM International Conference on Bioinformatics …, 2018 | 4 | 2018 |
Ultra-rapid nanopore whole genome genetic diagnosis of dilated cardiomyopathy in an adolescent with cardiogenic shock JE Gorzynski, SD Goenka, K Shafin, TD Jensen, DG Fisk, ME Grove, ... Circulation: Genomic and Precision Medicine 15 (2), e003591, 2022 | 3 | 2022 |
A 3′UTR Insertion Is a Candidate Causal Variant at the TMEM106B Locus Associated With Increased Risk for FTLD-TDP A Chemparathy, Y Le Guen, Y Zeng, J Gorzynski, TD Jensen, C Yang, ... Neurology: Genetics 10 (1), e200124, 2024 | 2 | 2024 |
A 3' UTR Deletion Is a Leading Candidate Causal Variant at the TMEM106B Locus Reducing Risk for FTLD-TDP. A Chemparathy, YL Guen, Y Zeng, J Gorzynski, T Jensen, N Kasireddy, ... Medrxiv: the Preprint Server for Health Sciences, 2023 | 2 | 2023 |
Near-fatal Legionella pneumonia in a neonate linked to home humidifier by metagenomic next generation sequencing PT West, EF Brooks, C Costales, A Moreno, TD Jensen, I Budvytiene, ... Med 3 (8), 565-567, 2022 | 2 | 2022 |
280 osteogenic activity of in house-produced porcine bmp2 on adipose-derived stem cells ACM Ercolin, M Mkrtschjan, M Bionaz, T Jensen, MB Wheeler Reproduction, Fertility and Development 25 (1), 288-288, 2012 | 2 | 2012 |
Impact of genome build on RNA-seq interpretation and diagnostics RA Ungar, PC Goddard, TD Jensen, F Degalez, KS Smith, CA Jin, ... medRxiv, 2024 | | 2024 |
Clinical application of Complete Long Read genome sequencing identifies a 16kb intragenic duplication in EHMT1 in a patient with suspected Kleefstra syndrome JE Gorzynski, S Marwaha, CM Reuter, T Jensen, A Ferrasse, A Raja, ... medRxiv, 2024.03. 28.24304304, 2024 | | 2024 |
Integration of transcriptomics and long-read genomics prioritizes structural variants in rare disease TD Jensen, B Ni, C Reuter, JE Gorzynski, S Fazal, DE Bonner, RA Ungar, ... medRxiv, 2024.03. 22.24304565, 2024 | | 2024 |
Novel characterization of Alzheimer’s disease genetic loci using long‐read sequencing L Talozzi, A Chemparathy, TD Jensen, J Gorzynski, ME Belloy, YL Guen, ... Alzheimer's & Dementia 19, e082689, 2023 | | 2023 |