Wenqiang Shi
Wenqiang Shi
Universitity of British Columbia
Geverifieerd e-mailadres voor cmmt.ubc.ca
TitelGeciteerd doorJaar
JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles
A Mathelier, O Fornes, DJ Arenillas, C Chen, G Denay, J Lee, W Shi, ...
Nucleic acids research 44 (D1), D110-D115, 2015
7112015
Identification of altered cis-regulatory elements in human disease
A Mathelier, W Shi, WW Wasserman
Trends in Genetics 31 (2), 67-76, 2015
692015
Evaluating the impact of single nucleotide variants on transcription factor binding
W Shi, O Fornes, A Mathelier, WW Wasserman
Nucleic acids research 44 (21), 10106-10116, 2016
282016
Genome-wide prediction of cis-regulatory regions using supervised deep learning methods
Y Li, W Shi, WW Wasserman
BMC bioinformatics 19 (1), 202, 2018
252018
Deep learning in omics: a survey and guideline
Z Zhang, Y Zhao, X Liao, W Shi, K Li, Q Zou, S Peng
Briefings in functional genomics 18 (1), 41-57, 2018
172018
YY1 binding association with sex-biased transcription revealed through X-linked transcript levels and allelic binding analyses
C Chen, W Shi, BP Balaton, AM Matthews, Y Li, DJ Arenillas, A Mathelier, ...
Scientific reports 6, 37324, 2016
122016
Gene expression models based on transcription factor binding events confer insight into functional cis-regulatory variants
W Shi, O Fornes, WW Wasserman
Bioinformatics, 2018
32018
VCSRA: A fast and accurate multiple sequence alignment algorithm with a high degree of parallelism.
D Dong, W Su, W Shi, Q Zou, S Peng
Journal of genetics and genomics= Yi chuan xue bao 45 (7), 407, 2018
12018
Altered transcription factor binding events predict personalized gene expression and confer insight into functional cis-regulatory variants
W Shi, O Fornes, WW Wasserman
bioRxiv, 228155, 2017
12017
Revealing the impact of sequence variants on transcription factor binding and gene expression
W Shi
University of British Columbia, 2017
2017
A role for YY1 in sex-biased transcription revealed through X-linked promoter activity and allelic binding analyses
C Chen, W Shi, AM Matthews, Y Li, DJ Arenillas, A Mathelier, M Itoh, ...
bioRxiv, 044172, 2016
2016
Scientific Life
JA O’Rawe, S Ferson, GJ Lyon, A Mathelier, W Shi, WW Wasserman, ...
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Artikelen 1–12