One thousand plant transcriptomes and the phylogenomics of green plants Nature 574 (7780), 679-685, 2019 | 1385 | 2019 |
Major impacts of widespread structural variation on gene expression and crop improvement in tomato M Alonge, X Wang, M Benoit, S Soyk, L Pereira, L Zhang, H Suresh, ... Cell 182 (1), 145-161. e23, 2020 | 604 | 2020 |
Genome-wide patterns of nucleotide polymorphism in domesticated rice AL Caicedo, SH Williamson, RD Hernandez, A Boyko, A Fledel-Alon, ... PLoS genetics 3 (9), e163, 2007 | 488 | 2007 |
Epistatic interaction between Arabidopsis FRI and FLC flowering time genes generates a latitudinal cline in a life history trait AL Caicedo, JR Stinchcombe, KM Olsen, J Schmitt, MD Purugganan Proceedings of the National Academy of Sciences 101 (44), 15670-15675, 2004 | 427 | 2004 |
The Extent of Linkage Disequilibrium in Rice (Oryza sativa L.) KA Mather, AL Caicedo, NR Polato, KM Olsen, S McCouch, ... Genetics 177 (4), 2223-2232, 2007 | 398 | 2007 |
Brachypodium as a model for the grasses: today and the future J Brkljacic, E Grotewold, R Scholl, T Mockler, DF Garvin, P Vain, T Brutnell, ... Plant physiology 157 (1), 3-13, 2011 | 325 | 2011 |
Extensive gene content variation in the Brachypodium distachyon pan-genome correlates with population structure SP Gordon, B Contreras-Moreira, DP Woods, DL Des Marais, D Burgess, ... Nature communications 8 (1), 2184, 2017 | 321 | 2017 |
Selection Under Domestication: Evidence for a Sweep in the Rice Waxy Genomic Region KM Olsen, AL Caicedo, N Polato, A McClung, S McCouch, ... Genetics 173 (2), 975-983, 2006 | 289 | 2006 |
Genomic evidence for complex domestication history of the cultivated tomato in Latin America H Razifard, A Ramos, AL Della Valle, C Bodary, E Goetz, EJ Manser, X Li, ... Molecular biology and evolution 37 (4), 1118-1132, 2020 | 193 | 2020 |
Fitness Effects Associated with the Major Flowering Time Gene FRIGIDA in Arabidopsis thaliana in the Field TM Korves, KJ Schmid, AL Caicedo, C Mays, JR Stinchcombe, ... The American Naturalist 169 (5), E141-E157, 2007 | 193 | 2007 |
The red queen in the corn: agricultural weeds as models of rapid adaptive evolution CC Vigueira, KM Olsen, AL Caicedo Heredity 110 (4), 303-311, 2013 | 182 | 2013 |
Signatures of adaptation in the weedy rice genome LF Li, YL Li, Y Jia, AL Caicedo, KM Olsen Nature genetics 49 (5), 811-814, 2017 | 180 | 2017 |
Diversity and molecular evolution of the RPS2 resistance gene in Arabidopsis thaliana AL Caicedo, BA Schaal, BN Kunkel Proceedings of the National Academy of Sciences 96 (1), 302-306, 1999 | 175 | 1999 |
Weedy (red) rice: an emerging constraint to global rice production LH Ziska, DR Gealy, N Burgos, AL Caicedo, J Gressel, AL Lawton-Rauh, ... Advances in agronomy 129, 181-228, 2015 | 163 | 2015 |
Molecular evolution of shattering loci in US weedy rice CS Thurber, M Reagon, BL Gross, KM Olsen, Y Jia, AL Caicedo Molecular ecology 19 (16), 3271-3284, 2010 | 158 | 2010 |
Population structure and phylogeography of Solanum pimpinellifolium inferred from a nuclear gene AL Caicedo, BA Schaal Molecular Ecology 13 (7), 1871-1882, 2004 | 155 | 2004 |
Genomic patterns of nucleotide diversity in divergent populations of US weedy rice M Reagon, CS Thurber, BL Gross, KM Olsen, Y Jia, AL Caicedo BMC Evolutionary Biology 10, 1-16, 2010 | 135 | 2010 |
The impact of herbicide-resistant rice technology on phenotypic diversity and population structure of United States weedy rice NR Burgos, V Singh, TM Tseng, H Black, ND Young, Z Huang, KE Hyma, ... Plant physiology 166 (3), 1208-1220, 2014 | 128 | 2014 |
AFLP Fingerprinting of Phaseolus lunatus L. and Related Wild Species from South America AL Caicedo, E Gaitán, MC Duque, OT Chica, DG Debouck, J Tohme Crop Science 39 (5), 1497-1507, 1999 | 128 | 1999 |
Darwinian selection on a selfing locus KK Shimizu, JM Cork, AL Caicedo, CA Mays, RC Moore, KM Olsen, ... Science 306 (5704), 2081-2084, 2004 | 119 | 2004 |