Tomoko OHTA
Tomoko OHTA
textimi
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GENIA corpus—a semantically annotated corpus for bio-textmining
JD Kim, T Ohta, Y Tateisi, J Tsujii
Bioinformatics 19 (suppl_1), i180-i182, 2003
12342003
BRAT: a web-based tool for NLP-assisted text annotation
P Stenetorp, S Pyysalo, G Topić, T Ohta, S Ananiadou, J Tsujii
Proceedings of the Demonstrations at the 13th Conference of the European …, 2012
10622012
Overview of BioNLP’09 shared task on event extraction
JD Kim, T Ohta, S Pyysalo, Y Kano, J Tsujii
Proceedings of the BioNLP 2009 workshop companion volume for shared task, 1-9, 2009
7312009
Developing a robust part-of-speech tagger for biomedical text
Y Tsuruoka, Y Tateishi, JD Kim, T Ohta, J McNaught, S Ananiadou, ...
Panhellenic conference on informatics, 382-392, 2005
5972005
Introduction to the bio-entity recognition task at JNLPBA
JD Kim, T Ohta, Y Tsuruoka, Y Tateisi, N Collier
Proceedings of the international joint workshop on natural language …, 2004
5742004
Corpus annotation for mining biomedical events from literature
JD Kim, T Ohta, J Tsujii
BMC bioinformatics 9 (1), 1-25, 2008
4372008
The GENIA corpus: An annotated research abstract corpus in molecular biology domain
T Ohta, Y Tateisi, JD Kim, H Mima, J Tsujii
Proceedings of the human language technology conference, 73-77, 2002
3592002
Overview of BioNLP shared task 2013
C Nédellec, R Bossy, JD Kim, JJ Kim, T Ohta, S Pyysalo, P Zweigenbaum
Proceedings of the BioNLP shared task 2013 workshop, 1-7, 2013
2152013
Syntax Annotation for the GENIA corpus
Y Tateisi, A Yakushiji, T Ohta, J Tsujii
Companion Volume to the Proceedings of Conference including Posters/Demos …, 2005
1332005
Semantic retrieval for the accurate identification of relational concepts in massive textbases
Y Miyao, T Ohta, K Masuda, Y Tsuruoka, K Yoshida, T Ninomiya, J Tsujii
Proceedings of the 21st International Conference on Computational …, 2006
1232006
Event extraction across multiple levels of biological organization
S Pyysalo, T Ohta, M Miwa, HC Cho, J Tsujii, S Ananiadou
Bioinformatics 28 (18), i575-i581, 2012
1122012
The GENIA project: corpus-based knowledge acquisition and information extraction from genome research papers
N Collier, HS Park, N Ogata, Y Tateisi, C Nobata, T Ohta, T Sekimizu, ...
Ninth Conference of the European Chapter of the Association for …, 1999
1061999
AKANE system: protein-protein interaction pairs in BioCreAtIvE2 challenge, PPI-IPS subtask
R Sætre, K Yoshida, A Yakushiji, Y Miyao, Y Matsubayashi, T Ohta
Proceedings of the second biocreative challenge workshop 209, 212, 2007
822007
New challenges for text mining: mapping between text and manually curated pathways
K Oda, JD Kim, T Ohta, D Okanohara, T Matsuzaki, Y Tateisi, J Tsujii
BMC bioinformatics 9 (3), 1-14, 2008
792008
Overview of the ID, EPI and REL tasks of BioNLP Shared Task 2011
S Pyysalo, T Ohta, R Rak, D Sullivan, C Mao, C Wang, B Sobral, J Tsujii, ...
BMC bioinformatics 13 (11), 1-26, 2012
712012
BioCause: Annotating and analysing causality in the biomedical domain
C Mihăilă, T Ohta, S Pyysalo, S Ananiadou
BMC bioinformatics 14 (1), 1-18, 2013
632013
EXTRACTING BIO‐MOLECULAR EVENTS FROM LITERATURE—THE BIONLP’09 SHARED TASK
JD Kim, T Ohta, S Pyysalo, Y Kano, J Tsujii
Computational Intelligence 27 (4), 513-540, 2011
592011
Open-domain anatomical entity mention detection
T Ohta, S Pyysalo, J Tsujii, S Ananiadou
Proceedings of the workshop on detecting structure in scholarly discourse, 27-36, 2012
542012
Automatic construction of predicate-argument structure patterns for biomedical information extraction
A Yakushiji, Y Miyao, T Ohta, Y Tateisi, J Tsujii
Proceedings of the 2006 Conference on Empirical Methods in Natural Language …, 2006
532006
Overview of the cancer genetics and pathway curation tasks of bionlp shared task 2013
S Pyysalo, T Ohta, R Rak, A Rowley, HW Chun, SJ Jung, SP Choi, J Tsujii, ...
BMC bioinformatics 16 (10), 1-19, 2015
522015
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