| Genome-wide and caste-specific DNA methylomes of the ants Camponotus floridanus and Harpegnathos saltator R Bonasio, Q Li, J Lian, NS Mutti, L Jin, H Zhao, P Zhang, P Wen, H Xiang, ... Current Biology 22 (19), 1755-1764, 2012 | 399 | 2012 |
| On the origin of new genes in Drosophila Q Zhou, G Zhang, Y Zhang, S Xu, R Zhao, Z Zhan, X Li, Y Ding, S Yang, ... Genome research 18 (9), 1446-1455, 2008 | 299 | 2008 |
| Outbred genome sequencing and CRISPR/Cas9 gene editing in butterflies X Li, D Fan, W Zhang, G Liu, L Zhang, L Zhao, X Fang, L Chen, Y Dong, ... Nature communications 6, 8212, 2015 | 193 | 2015 |
| Natural courtship song variation caused by an intronic retroelement in an ion channel gene Y Ding, A Berrocal, T Morita, KD Longden, DL Stern Nature 536 (7616), 329, 2016 | 148 | 2016 |
| Repetitive element-mediated recombination as a mechanism for new gene origination in Drosophila S Yang, JR Arguello, X Li, Y Ding, Q Zhou, Y Chen, Y Zhang, R Zhao, ... PLoS genetics 4 (1), e3, 2008 | 102 | 2008 |
| Origins of new genes and evolution of their novel functions Y Ding, Q Zhou, W Wang Annual Review of Ecology, Evolution, and Systematics 43, 345-363, 2012 | 92 | 2012 |
| Neural Evolution of Context-Dependent Fly Song Y Ding, JL Lillvis, J Cande, GJ Berman, BJ Arthur, X Long, M Xu, ... Current Biology, 2019 | 79 | 2019 |
| A young Drosophila duplicate gene plays essential roles in spermatogenesis by regulating several Y-linked male fertility genes Y Ding, L Zhao, S Yang, Y Jiang, Y Chen, R Zhao, Y Zhang, G Zhang, ... PLoS genetics 6 (12), e1001255, 2010 | 73 | 2010 |
| Genetic and Transgenic Reagents for Drosophila simulans, D. mauritiana, D. yakuba, D. santomea, and D. virilis DL Stern, J Crocker, Y Ding, N Frankel, G Kappes, E Kim, R Kuzmickas, ... G3: Genes, Genomes, Genetics 7 (4), 1339-1347, 2017 | 63 | 2017 |
| Comparative methylomics between domesticated and wild silkworms implies possible epigenetic influences on silkworm domestication H Xiang, X Li, F Dai, X Xu, A Tan, L Chen, G Zhang, Y Ding, Q Li, J Lian, ... BMC genomics 14 (1), 646, 2013 | 61 | 2013 |
| Next generation multilocus sequence typing (NGMLST) and the analytical software program MLSTEZ enable efficient, cost-effective, high-throughput, multilocus sequencing typing Y Chen, AE Frazzitta, AP Litvintseva, C Fang, TG Mitchell, DJ Springer, ... Fungal Genetics and Biology 75, 64-71, 2015 | 42 | 2015 |
| Rapid Functional Divergence of a Newly Evolved Polyubiquitin Gene in Drosophila and Its Role in the Trade-off between Male Fecundity and Lifespan Z Zhan, Y Ding, R Zhao, Y Zhang, H Yu, Q Zhou, S Yang, H Xiang, ... Molecular biology and evolution 29 (5), 1407-1416, 2011 | 16 | 2011 |
| SongExplorer: A deep learning workflow for discovery and segmentation of animal acoustic communication signals BJ Arthur, Y Ding, M Sosale, F Khalif, E Kim, P Waddell, SC Turaga, ... bioRxiv, 2021.03. 26.437280, 2021 | 10 | 2021 |
| Neural Changes Underlying Rapid Fly Song Evolution Y Ding, JL Lillvis, J Cande, GJ Berman, BJ Arthur, M Xu, BJ Dickson, ... bioRxiv, 238147, 2017 | 10 | 2017 |
| Evolution of vertebrate central nervous system is accompanied by novel expression changes of duplicate genes Y Chen, Y Ding, Z Zhang, W Wang, JY Chen, N Ueno, B Mao Journal of Genetics and Genomics 38 (12), 577-584, 2011 | 10 | 2011 |
| Combined in Situ Hybridization Chain Reaction and Immunostaining to Visualize Gene Expression in Whole-Mount Drosophila Central Nervous Systems JC Duckhorn, IP Junker, Y Ding, TR Shirangi Behavioral Neurogenetics, 1-14, 2022 | 7 | 2022 |
| Song Torrent: A modular, open-source 96-chamber audio and video recording apparatus with optogenetic activation and inactivation capabilities for Drosophila S Sawtelle, L Narayan, Y Ding, E Kim, EL Berhman, JL Lillvis, T Kawase, ... bioRxiv, 2024.01. 09.574712, 2024 | 1 | 2024 |
| Ancestral neural circuits potentiate the origin of a female sexual behavior M Li, DS Chen, IP Junker, F Szorenyi, GH Chen, AJ Berger, AA Comeault, ... bioRxiv, 2023 | 1 | 2023 |
| Changes in the cellular makeup of motor patterning circuits drive courtship song evolution in Drosophila D Ye, JT Walsh, IP Junker, Y Ding bioRxiv, 2024.01. 23.576861, 2024 | | 2024 |
| A modular circuit architecture coordinates the diversification of courtship strategies in Drosophila RT Coleman, I Morantte, GT Koreman, ML Cheng, Y Ding, V Ruta bioRxiv, 2023 | | 2023 |
