Matt Settles
Matt Settles
Director, Genome Center Bioinformatics Core, UC Davis
Verified email at ucdavis.edu - Homepage
Title
Cited by
Cited by
Year
Epigenetic transgenerational actions of vinclozolin on promoter regions of the sperm epigenome
C Guerrero-Bosagna, M Settles, B Lucker, MK Skinner
PLoS One 5 (9), e13100, 2010
3922010
Epigenetic transgenerational inheritance of vinclozolin induced mouse adult onset disease and associated sperm epigenome biomarkers
C Guerrero-Bosagna, TR Covert, MM Haque, M Settles, EE Nilsson, ...
Reproductive toxicology 34 (4), 694-707, 2012
2032012
Breeding swarms: a GA/PSO hybrid
M Settles, T Soule
Proceedings of the 7th annual conference on Genetic and evolutionary …, 2005
1502005
Microbiota of the seminal fluid from healthy and infertile men
D Hou, X Zhou, X Zhong, ML Settles, J Herring, L Wang, Z Abdo, ...
Fertility and sterility 100 (5), 1261-1269. e3, 2013
1452013
A whole genome association analysis identifies loci associated with Mycobacterium avium subsp. paratuberculosis infection status in US holstein cattle
M Settles, R Zanella, SD McKay, RD Schnabel, JF Taylor, R Whitlock, ...
Animal genetics 40 (5), 655-662, 2009
1162009
Genome-wide transcriptional response of Silurana (Xenopus) tropicalis to infection with the deadly chytrid fungus
EB Rosenblum, TJ Poorten, M Settles, GK Murdoch, J Robert, N Maddox, ...
PloS one 4 (8), e6494, 2009
1142009
Effect of starvation on transcriptomes of brain and liver in adult female zebrafish (Danio rerio)
RE Drew, KJ Rodnick, M Settles, J Wacyk, E Churchill, MS Powell, ...
Physiological genomics 35 (3), 283-295, 2008
1102008
An Introduction to Particle Swarm Optimization
M Settles
Department of Computer Science, University of Idaho, 2005
1012005
Vaginal microbiota of adolescent girls prior to the onset of menarche resemble those of reproductive-age women
RJ Hickey, X Zhou, ML Settles, J Erb, K Malone, MA Hansmann, ML Shew, ...
MBio 6 (2), 2015
992015
A forward genetic screen reveals that calcium-dependent protein kinase 3 regulates egress in Toxoplasma
E Garrison, M Treeck, E Ehret, H Butz, T Garbuz, BP Oswald, M Settles, ...
PLoS Pathog 8 (11), e1003049, 2012
992012
Only skin deep: shared genetic response to the deadly chytrid fungus in susceptible frog species
EB ROSENBLUM, TJ POORTEN, M SETTLES, GK MURDOCH
Molecular Ecology, 2012
852012
Prenatal exposure to BPA alters the epigenome of the rat mammary gland and increases the propensity to neoplastic development
E Dhimolea, PR Wadia, TJ Murray, ML Settles, JD Treitman, ...
PloS one 9 (7), e99800, 2014
842014
Transcriptome analysis of high‐temperature adult‐plant resistance conditioned by Yr39 during the wheat–Puccinia striiformis f. sp. tritici interaction
TE CORAM, ML SETTLES, X Chen
Molecular plant pathology 9 (4), 479-493, 2008
792008
Evolutionary paths that expand plasmid host-range: implications for spread of antibiotic resistance
W Loftie-Eaton, H Yano, S Burleigh, RS Simmons, JM Hughes, ...
Molecular biology and evolution 33 (4), 885-897, 2016
742016
Sexual dimorphism in hepatic gene expression and the response to dietary carbohydrate manipulation in the zebrafish (Danio rerio)
BD Robison, RE Drew, GK Murdoch, M Powell, KJ Rodnick, M Settles, ...
Comparative Biochemistry and Physiology Part D: Genomics and Proteomics 3 (2 …, 2008
722008
Comparison of genetic algorithm and particle swarm optimizer when evolving a recurrent neural network
M Settles, B Rodebaugh, T Soule
Genetic and Evolutionary Computation—GECCO 2003, 200-200, 2003
692003
Neural network learning using particle swarm optimizers
M Settles, B Rylander
Advances in information science and soft computing, 224-226, 2002
69*2002
A phylogenomic approach based on PCR target enrichment and high throughput sequencing: Resolving the diversity within the South American species of Bartsia L.(Orobanchaceae)
S Uribe-Convers, ML Settles, DC Tank
PLoS One 11 (2), e0148203, 2016
642016
Human milk microbial community structure is relatively stable and related to variations in macronutrient and micronutrient intakes in healthy lactating women
JE Williams, JM Carrothers, KA Lackey, NF Beatty, MA York, SL Brooker, ...
The Journal of nutrition 147 (9), 1739-1748, 2017
632017
Soil bacterial communities of different natural forest types in Northeast China
H Li, D Ye, X Wang, ML Settles, J Wang, Z Hao, L Zhou, P Dong, Y Jiang, ...
Plant and Soil 383 (1), 203-216, 2014
602014
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