Suivre
Qiqing Tao
Qiqing Tao
Institute for Genomics and Evolutionary Medicine, Temple University
Adresse e-mail validée de temple.edu
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Theoretical foundation of the RelTime method for estimating divergence times from variable evolutionary rates
K Tamura, Q Tao, S Kumar
Molecular biology and evolution 35 (7), 1770-1782, 2018
1662018
An evolutionary portrait of the progenitor SARS-CoV-2 and its dominant offshoots in COVID-19 pandemic
S Kumar, Q Tao, S Weaver, M Sanderford, MA Caraballo-Ortiz, S Sharma, ...
Molecular Biology and Evolution 38 (8), 3046-3059, 2021
732021
Fast and accurate estimates of divergence times from big data
B Mello, Q Tao, K Tamura, S Kumar
Molecular biology and evolution 34 (1), 45-50, 2017
532017
A Machine Learning Method for Detecting Autocorrelation of Evolutionary Rates in Large Phylogenies
Q Tao, K Tamura, F U. Battistuzzi, S Kumar
Molecular biology and evolution 36 (4), 811-824, 2019
482019
Reliable confidence intervals for RelTime estimates of evolutionary divergence times
Q Tao, K Tamura, S Kumar
Molecular Biology and Evolution 37 (1), 280-290, 2020
372020
Accurate timetrees require accurate calibrations
SB Hedges, Q Tao, M Walker, S Kumar
Proceedings of the National Academy of Sciences 115 (41), E9510-E9511, 2018
292018
RelTime relaxes the strict molecular clock throughout the phylogeny
FU Battistuzzi, Q Tao, L Jones, K Tamura, S Kumar
Genome Biology and Evolution 10 (6), 1631-1636, 2018
272018
Molecular dating for phylogenies containing a mix of populations and species by using Bayesian and RelTime approaches
B Mello, Q Tao, J Barba‐Montoya, S Kumar
Molecular ecology resources 21 (1), 122-136, 2021
222021
A new method for inferring timetrees from temporally sampled molecular sequences
S Miura, K Tamura, Q Tao, LA Huuki, SL Kosakovsky Pond, J Priest, ...
PLOS Computational Biology 16 (1), e1007046, 2020
222020
Efficient methods for dating evolutionary divergences
Q Tao, K Tamura, S Kumar
The Molecular Evolutionary Clock: Theory and Practice, 197-219, 2020
182020
Relative efficiencies of simple and complex substitution models in estimating divergence times in phylogenomics
Q Tao, J Barba-Montoya, LA Huuki, MK Durnan, S Kumar
Molecular Biology and Evolution 37 (6), 1819-1831, 2020
152020
Expressional Analysis of Immunoglobulin D in Cattle (Bos taurus), a Large Domesticated Ungulate
B Xu, J Wang, M Zhang, P Wang, Z Wei, Y Sun, Q Tao, L Ren, X Hu, ...
Public Library of Science 7 (9), e44719, 2012
142012
Data-driven speciation tree prior for better species divergence times in calibration-poor molecular phylogenies
Q Tao, J Barba-Montoya, S Kumar
Bioinformatics 37 (Supplement_1), i102-i110, 2021
92021
TopHap: rapid inference of key phylogenetic structures from common haplotypes in large genome collections with limited diversity
MA Caraballo-Ortiz, S Miura, M Sanderford, T Dolker, Q Tao, S Weaver, ...
Bioinformatics 38 (10), 2719-2726, 2022
82022
Molecular and morphological clocks for estimating evolutionary divergence times
J Barba-Montoya, Q Tao, S Kumar
BMC Ecology and Evolution 21 (1), 83, 2021
82021
Using a GTR+ Γ substitution model for dating sequence divergence when stationarity and time-reversibility assumptions are violated
J Barba-Montoya, Q Tao, S Kumar
Bioinformatics 36 (Supplement_2), i884-i894, 2020
82020
Assessing rapid relaxed-clock methods for phylogenomic dating
J Barba-Montoya, Q Tao, S Kumar
Genome Biology and Evolution 13 (11), evab251, 2021
72021
Kosakovsky Pond SL, Priest J., Deng J., Kumar S. 2020. A new method for inferring timetrees from temporally sampled molecular sequences
S Miura, K Tamura, Q Tao, LA Huuki
PLoS Comput. Biol 16, e1007046, 0
4
Computational reproducibility of molecular phylogenies
S Kumar, Q Tao, AP Lamarca, K Tamura
Molecular Biology and Evolution 40 (7), msad165, 2023
2023
Molecular Dating: Theoretical and Practical Investigations in Phylogenomics
Q Tao
Temple University, 2019
2019
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