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Ayshwarya Subramanian
Ayshwarya Subramanian
Broad Institute
Verified email at broadinstitute.org - Homepage
Title
Cited by
Cited by
Year
A cellular taxonomy of the bone marrow stroma in homeostasis and leukemia
N Baryawno, D Przybylski, MS Kowalczyk, Y Kfoury, N Severe, ...
Cell 177 (7), 1915-1932. e16, 2019
4142019
COVID-19 tissue atlases reveal SARS-CoV-2 pathology and cellular targets
TM Delorey, CGK Ziegler, G Heimberg, R Normand, Y Yang, ...
Nature 595 (7865), 107-113, 2021
2582021
Multivariable association discovery in population-scale meta-omics studies
H Mallick, A Rahnavard, LJ McIver, S Ma, Y Zhang, LH Nguyen, TL Tickle, ...
PLoS computational biology 17 (11), e1009442, 2021
2352021
Integrated analyses of single-cell atlases reveal age, gender, and smoking status associations with cell type-specific expression of mediators of SARS-CoV-2 viral entry and …
C Muus, MD Luecken, G Eraslan, A Waghray, G Heimberg, L Sikkema, ...
BioRxiv, 2020
2282020
Stability of the human faecal microbiome in a cohort of adult men
RS Mehta, GS Abu-Ali, DA Drew, J Lloyd-Price, A Subramanian, ...
Nature microbiology 3 (3), 347-355, 2018
1652018
Single-cell meta-analysis of SARS-CoV-2 entry genes across tissues and demographics
C Muus, MD Luecken, G Eraslan, L Sikkema, A Waghray, G Heimberg, ...
Nature medicine, 1-14, 2021
1522021
Single-cell analysis of the normal mouse aorta reveals functionally distinct endothelial cell populations
AS Kalluri, SK Vellarikkal, ER Edelman, L Nguyen, A Subramanian, ...
Circulation 140 (2), 147-163, 2019
1432019
A practical guide to methods controlling false discoveries in computational biology
K Korthauer, PK Kimes, C Duvallet, A Reyes, A Subramanian, M Teng, ...
Genome biology 20 (1), 1-21, 2019
1292019
Emergence of a high-plasticity cell state during lung cancer evolution
ND Marjanovic, M Hofree, JE Chan, D Canner, K Wu, M Trakala, ...
Cancer cell 38 (2), 229-246. e13, 2020
1272020
Single cell census of human kidney organoids shows reproducibility and diminished off-target cells after transplantation
A Subramanian, EH Sidhom, M Emani, K Vernon, N Sahakian, Y Zhou, ...
Nature communications 10 (1), 1-15, 2019
912019
Deep learning and alignment of spatially resolved single-cell transcriptomes with Tangram
T Biancalani, G Scalia, L Buffoni, R Avasthi, Z Lu, A Sanger, N Tokcan, ...
Nature methods 18 (11), 1352-1362, 2021
552021
Robust unmixing of tumor states in array comparative genomic hybridization data
D Tolliver, C Tsourakakis, A Subramanian, S Shackney, R Schwartz
Bioinformatics 26 (12), i106-i114, 2010
402010
A high-content screen for mucin-1-reducing compounds identifies fostamatinib as a candidate for rapid repurposing for acute lung injury
M Kost-Alimova, EH Sidhom, A Satyam, BT Chamberlain, M Dvela-Levitt, ...
Cell Reports Medicine 1 (8), 100137, 2020
302020
A single-cell and spatial atlas of autopsy tissues reveals pathology and cellular targets of SARS-CoV-2
TM Delorey, CGK Ziegler, G Heimberg, R Normand, Y Yang, ...
bioRxiv, 2021
252021
Single-nucleus cross-tissue molecular reference maps toward understanding disease gene function
G Eraslan, E Drokhlyansky, S Anand, E Fiskin, A Subramanian, M Slyper, ...
Science 376 (6594), eabl4290, 2022
242022
Inference of tumor phylogenies from genomic assays on heterogeneous samples
A Subramanian, S Shackney, S Russell
Proceedings of the 2nd ACM Conference on Bioinformatics, Computational …, 2011
202011
A high content screen for mucin-1-reducing compounds identifies fostamatinib as a candidate for rapid repurposing for acute lung injury during the COVID-19 pandemic
M Alimova, EH Sidhom, A Satyam, M Dvela-Levitt, M Melanson, ...
bioRxiv, 2020
192020
Retinoblastoma: expression of HLA-G
M Adithi, M Kandalam, HL Ramkumar, A Subramanian, N Venkatesan, ...
Ocular immunology and inflammation 14 (4), 207-213, 2006
182006
ImmGen at 15
SV Aguilar, O Aguilar, R Allan, V Angeli, MN Artyomov, N Asinovski, ...
Nature immunology 21 (7), 700-703, 2020
172020
Single-nucleus cross-tissue molecular reference maps to decipher disease gene function
G Eraslan, E Drokhlyansky, S Anand, A Subramanian, E Fiskin, M Slyper, ...
bioRxiv, 2021
162021
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