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Handuo Shi
Handuo Shi
Verified email at stanford.edu
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Cited by
Cited by
Year
A comprehensive, CRISPR-based functional analysis of essential genes in bacteria
JM Peters, A Colavin, H Shi, TL Czarny, MH Larson, S Wong, JS Hawkins, ...
Cell 165 (6), 1493-1506, 2016
4842016
Disruption of lipid homeostasis in the Gram-negative cell envelope activates a novel cell death pathway
HA Sutterlin, H Shi, KL May, A Miguel, S Khare, KC Huang, TJ Silhavy
Proceedings of the National Academy of Sciences 113 (11), E1565-E1574, 2016
1202016
Quantum cloning machines and the applications
H Fan, YN Wang, L Jing, JD Yue, HD Shi, YL Zhang, LZ Mu
Physics Reports 544 (3), 241-322, 2014
1112014
How to Build a Bacterial Cell: MreB as the Foreman of E. coli Construction
H Shi, BP Bratton, Z Gitai, KC Huang
Cell 172 (6), 1294-1305, 2018
1102018
Monoclonal antibody targeting the β-barrel assembly machine of Escherichia coli is bactericidal
KM Storek, MR Auerbach, H Shi, NK Garcia, D Sun, NN Nickerson, R Vij, ...
Proceedings of the National Academy of Sciences 115 (14), 3692-3697, 2018
1082018
Rapid, precise quantification of bacterial cellular dimensions across a genomic-scale knockout library
T Ursell, TK Lee, D Shiomi, H Shi, C Tropini, RD Monds, A Colavin, ...
BMC biology 15 (1), 1-15, 2017
922017
Deep phenotypic mapping of bacterial cytoskeletal mutants reveals physiological robustness to cell size
H Shi, A Colavin, M Bigos, C Tropini, RD Monds, KC Huang
Current Biology 27 (22), 3419-3429. e4, 2017
542017
RodZ modulates geometric localization of the bacterial actin MreB to regulate cell shape
A Colavin, H Shi, KC Huang
Nature communications 9 (1), 1-11, 2018
492018
Single-molecule imaging reveals modulation of cell wall synthesis dynamics in live bacterial cells
TK Lee, K Meng, H Shi, KC Huang
Nature communications 7 (1), 1-9, 2016
432016
Programming a Pavlovian-like conditioning circuit in Escherichia coli
H Zhang, M Lin, H Shi, W Ji, L Huang, X Zhang, S Shen, R Gao, S Wu, ...
Nature communications 5 (1), 1-10, 2014
392014
A formalized design process for bacterial consortia that perform logic computing
W Ji, H Shi, H Zhang, R Sun, J Xi, D Wen, J Feng, Y Chen, X Qin, Y Ma, ...
PLoS One 8 (2), e57482, 2013
332013
Automated design of genetic toggle switches with predetermined bistability
S Chen, H Zhang, H Shi, W Ji, J Feng, Y Gong, Z Yang, Q Ouyang
ACS synthetic Biology 1 (7), 284-290, 2012
312012
Strain Library Imaging Protocol for high-throughput, automated single-cell microscopy of large bacterial collections arrayed on multiwell plates
H Shi, A Colavin, TK Lee, KC Huang
Nature protocols 12 (2), 429-438, 2017
292017
Unified universal quantum cloning machine and fidelities
YN Wang, HD Shi, ZX Xiong, L Jing, XJ Ren, LZ Mu, H Fan
Physical Review A 84 (3), 034302, 2011
272011
Klebsiella michiganensis transmission enhances resistance to Enterobacteriaceae gut invasion by nutrition competition
RA Oliveira, KM Ng, MB Correia, V Cabral, H Shi, JL Sonnenburg, ...
Nature microbiology 5 (4), 630-641, 2020
262020
Chiral twisting in a bacterial cytoskeletal polymer affects filament size and orientation
H Shi, DA Quint, GM Grason, A Gopinathan, KC Huang
Nature communications 11 (1), 1-12, 2020
202020
General quantum key distribution in higher dimension
ZX Xiong, HD Shi, YN Wang, L Jing, J Lei, LZ Mu, H Fan
Physical Review A 85 (1), 012334, 2012
182012
Starvation induces shrinkage of the bacterial cytoplasm
H Shi, CS Westfall, J Kao, PD Odermatt, SE Anderson, S Cesar, M Sievert, ...
Proceedings of the National Academy of Sciences 118 (24), e2104686118, 2021
162021
Precise regulation of the relative rates of surface area and volume synthesis in bacterial cells growing in dynamic environments
H Shi, Y Hu, PD Odermatt, CG Gonzalez, L Zhang, JE Elias, F Chang, ...
Nature communications 12 (1), 1-13, 2021
14*2021
The inner membrane protein YhdP modulates the rate of anterograde phospholipid flow in Escherichia coli
J Grimm, H Shi, W Wang, AM Mitchell, NS Wingreen, KC Huang, ...
Proceedings of the National Academy of Sciences 117 (43), 26907-26914, 2020
142020
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Articles 1–20