Dr. Matthias König
Dr. Matthias König
Geverifieerd e-mailadres voor hu-berlin.de - Homepage
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Geciteerd door
Jaar
HepatoNet1: a comprehensive metabolic reconstruction of the human hepatocyte for the analysis of liver physiology
C Gille, C Bölling, A Hoppe, S Bulik, S Hoffmann, K Hübner, A Karlstädt, ...
Molecular systems biology 6 (1), 2010
2882010
Quantifying the contribution of the liver to glucose homeostasis: a detailed kinetic model of human hepatic glucose metabolism
M König, S Bulik, HG Holzhütter
PLoS computational biology 8 (6), 2012
1572012
Enzymatic features of the glucose metabolism in tumor cells
A Herling, M König, S Bulik, HG Holzhütter
The FEBS journal 278 (14), 2436-2459, 2011
622011
libRoadRunner: a high performance SBML simulation and analysis library
ET Somogyi, JM Bouteiller, JA Glazier, M König, JK Medley, MH Swat, ...
Bioinformatics 31 (20), 3315-3321, 2015
612015
Modeling function–perfusion behavior in liver lobules including tissue, blood, glucose, lactate and glycogen by use of a coupled two-scale PDE–ODE approach
T Ricken, D Werner, HG Holzhütter, M König, U Dahmen, O Dirsch
Biomechanics and modeling in mechanobiology 14 (3), 515-536, 2015
442015
Toward community standards and software for whole-cell modeling
D Waltemath, JR Karr, FT Bergmann, V Chelliah, M Hucka, M Krantz, ...
IEEE Transactions on Biomedical Engineering 63 (10), 2007-2014, 2016
372016
Pathobiochemical signatures of cholestatic liver disease in bile duct ligated mice
K Abshagen, M König, A Hoppe, I Müller, M Ebert, H Weng, HG Holzhütter, ...
BMC systems biology 9 (1), 83, 2015
342015
CySBML: a Cytoscape plugin for SBML
M König, A Dräger, HG Holzhütter
Bioinformatics 28 (18), 2402-2403, 2012
332012
Fluxviz—Cytoscape plug-in for visualization of flux distributions in networks
M König, HG Holzhütter
Genome Informatics 2010: Genome Informatics Series Vol. 24, 96-103, 2010
282010
Harmonizing semantic annotations for computational models in biology
ML Neal, M König, D Nickerson, G Mısırlı, R Kalbasi, A Dräger, K Atalag, ...
Briefings in bioinformatics 20 (2), 540-550, 2019
152019
HEPATOKIN1 is a biochemistry-based model of liver metabolism for applications in medicine and pharmacology
N Berndt, S Bulik, I Wallach, T Wünsch, M König, M Stockmann, ...
Nature communications 9 (1), 1-12, 2018
132018
Tellurium notebooks—An environment for reproducible dynamical modeling in systems biology
JK Medley, K Choi, M König, L Smith, S Gu, J Hellerstein, SC Sealfon, ...
PLoS computational biology 14 (6), e1006220, 2018
122018
Computational modeling in liver surgery
B Christ, U Dahmen, KH Herrmann, M König, JR Reichenbach, T Ricken, ...
Frontiers in physiology 8, 906, 2017
122017
Metabolic gradients as key regulators in zonation of tumor energy metabolism: A tissue‐scale model‐based study
M König, HG Holzhütter, N Berndt
Biotechnology journal 8 (9), 1058-1069, 2013
112013
Kinetic modeling of human hepatic glucose metabolism in T2DM predicts higher risk of hypoglycemic events in rigorous insulin therapy
M Koenig, HG Holzhuetter
Journal of Biological Chemistry, jbc. M112. 382069, 2012
52012
Challenges and opportunities for system biology standards and tools in medical research.
M König, A Oellrich, D Waltemath, RJB Dobson, TJP Hubbard, ...
ODLS, 1-6, 2016
22016
cy3sabiork: A Cytoscape app for visualizing kinetic data from SABIO-RK
M König
F1000Research 5 (1736), 1736, 2016
12016
On the Influence of Growth in Perfusion Dependent Biological Systems–at the Example of the Human Liver
D Werner, T Ricken, U Dahmen, O Dirsch, HG Holzhütter, M König
Pamm 15 (1), 119-120, 2015
12015
Dynamic Flux Balance Analysis Models in SBML
L Watanabe, M König, C Myers
BioRXiv, 245076, 2018
2018
On a Multi Scale and Multi Phase Model for the Description of Drug Uptake by the Human Liver
D Werner, T Ricken, HG Holzhütter, M König, U Dahmen, O Dirsch
Book of Abstracts-Extract, 29, 2015
2015
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Artikelen 1–20